{"id":"W4318224942","doi":"10.2139/ssrn.4336851","title":"Metagenomic Analyses Detected Changes in the Antibiotic Resistome in Manure and Bedding on a Conventional Dairy Farm","year":2023,"lang":"en","type":"article","venue":"SSRN Electronic Journal","topic":"Biopolymer Synthesis and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Resistome; Manure; Metagenomics; Bedding; Antibiotics; Biotechnology; Environmental science; Biology; Microbiology; Antibiotic resistance; Agronomy; Botany","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008252851,0.00009611263,0.0001027014,0.0001715696,0.0001099522,0.00002913769,0.000171027,0.00007068789,0.000003766656],"category_scores_gemma":[0.00002971034,0.00007166622,0.00005123319,0.0002635284,0.00004283481,0.000002265585,0.0000298899,0.0003908823,0.000004918522],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005555932,"about_ca_system_score_gemma":0.0001425028,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000304165,"about_ca_topic_score_gemma":0.003767022,"domain_scores_codex":[0.9988617,0.000107978,0.0001452794,0.0001908214,0.00009743072,0.0005968105],"domain_scores_gemma":[0.9997396,0.00002880887,0.00006478558,0.0001321532,0.00001218327,0.00002240585],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001014561,0.000100235,0.005225441,0.0000112909,0.0001591045,0.000008770528,0.0001148703,0.00003306875,0.9700539,0.009135786,0.00008234195,0.01497381],"study_design_scores_gemma":[0.004271035,0.001761948,0.50755,0.0002016561,0.0002887055,0.0008758215,0.01429363,0.0007867924,0.4305112,0.02863053,0.009644081,0.001184579],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945011,0.003664818,0.00008149047,0.001508253,0.00002246091,0.0000960633,0.000005391541,0.000005423472,0.0001150106],"genre_scores_gemma":[0.9952616,0.004241399,0.00001229339,0.0001085231,0.00009903713,0.00001048502,0.00002099326,0.00001046925,0.0002352183],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5395426,"threshold_uncertainty_score":0.2922463,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02317748337913633,"score_gpt":0.3047219788878314,"score_spread":0.281544495508695,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}