{"id":"W4318473244","doi":"10.1111/tpj.16127","title":"Subgenome‐dominant expression and alternative splicing in response to <i>Sclerotinia</i> infection in polyploid <i>Brassica napus</i> and progenitors","year":2023,"lang":"en","type":"article","venue":"The Plant Journal","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Polyploid; Biology; Brassica rapa; Sclerotinia; Sclerotinia sclerotiorum; Genetics; Gene; Ploidy; Transcriptome; Brassica; Gene expression; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000837057,0.0002442379,0.0001916971,0.000291549,0.0001250722,0.0002571873,0.0001465242,0.0002398204,0.0005655931],"category_scores_gemma":[0.0001155636,0.0001889839,0.0002394272,0.000175627,0.0001707068,0.0001492809,0.0002061408,0.0003757061,0.0002000356],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000300056,"about_ca_system_score_gemma":0.0001202759,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001802775,"about_ca_topic_score_gemma":0.001918292,"domain_scores_codex":[0.999892,0.00001191741,0.000009842543,0.00004348585,0.00002029372,0.00002247872],"domain_scores_gemma":[0.9997979,0.0000328557,0.00006890034,0.00001939365,0.00002033763,0.00006063952],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003728732,0.000002735829,0.0003186737,0.000006338804,0.000001844653,0.00001497647,0.00001682835,0.000008283443,0.999433,0.000007664785,0.000003099228,0.0001492801],"study_design_scores_gemma":[0.00001871369,0.0005486228,0.3677471,0.00001213219,0.00005418592,0.0008077665,0.0003599564,0.001062543,0.6272253,0.00009915331,0.002037809,0.00002675796],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984711,0.0004049801,0.0003027681,0.0000228302,0.000003230467,0.000007498865,0.0004411859,0.0000227761,0.0003236666],"genre_scores_gemma":[0.9961907,0.0001996452,0.0005493892,0.00005174234,0.000003693613,0.00002326989,0.001565877,0.00002033817,0.001395353],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001802775,"threshold_uncertainty_score":0.003584623,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01941902189051816,"score_gpt":0.2258273939236414,"score_spread":0.2064083720331232,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}