{"id":"W4318478799","doi":"10.3390/v15020379","title":"Comparative Genomics of a Polyvalent Escherichia-Salmonella Phage fp01 and In Silico Analysis of Its Receptor Binding Protein and Conserved Enterobacteriaceae Phage Receptor","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada; Pontificia Universidad Católica de Valparaíso; Memorial University of Newfoundland","keywords":"Biology; Bacteriophage; Lytic cycle; Escherichia coli; Salmonella enterica; Microbiology; Genome; Genetics; Gene; Virus","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001824642,0.0001548804,0.0004211632,0.0002118744,0.0000545765,0.00002830585,0.000108436,0.00005932101,0.001241503],"category_scores_gemma":[0.00002472624,0.0001496637,0.00006575284,0.000806712,0.0001899611,0.0002208029,0.0002043812,0.00009233374,0.00008165582],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006783373,"about_ca_system_score_gemma":0.000009150098,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005766504,"about_ca_topic_score_gemma":0.0005812813,"domain_scores_codex":[0.9989335,0.0001107488,0.000380852,0.0002947927,0.00008547447,0.0001946273],"domain_scores_gemma":[0.9994711,0.00008022458,0.0002245826,0.0001448237,0.00001038684,0.0000689332],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001126371,0.0001074127,0.02020035,0.00003155845,0.0001561337,0.000001375916,0.00142489,0.00004112854,0.9776302,0.000002330448,0.0001026987,0.0001893023],"study_design_scores_gemma":[0.0003900737,0.00008844249,0.1613434,0.00006432353,0.00009818655,8.082688e-7,0.0006021527,0.0003996907,0.8353094,9.648137e-7,0.001554572,0.0001479051],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988838,0.0001089572,0.000004333087,0.00003990984,0.00006735149,0.0003641841,0.0004310154,0.00002080453,0.00007959633],"genre_scores_gemma":[0.998797,0.0003557694,0.0003891125,0.00003181516,0.000008058975,0.00002429804,0.00003425507,0.00001232233,0.000347385],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1423207,"threshold_uncertainty_score":0.9996715,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03932924851703192,"score_gpt":0.2833736937507043,"score_spread":0.2440444452336723,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}