{"id":"W4318482140","doi":"10.1128/spectrum.04618-22","title":"Development and Application of a Short Tandem Repeat Multiplex Typing Assay for Candida tropicalis","year":2023,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Radboud Universitair Medisch Centrum; Indian Council of Medical Research; Canadian Institute for Advanced Research","keywords":"Candida tropicalis; Typing; Biology; Genotyping; Genotype; Multiplex; Multiplex polymerase chain reaction; Tandem repeat; Genetics; Variable number tandem repeat; Single-nucleotide polymorphism; Microbiology; Polymerase chain reaction; Yeast; Genome; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001923473,0.0008698484,0.0005647606,0.001720681,0.0003838997,0.001103865,0.000749605,0.001212186,0.0009376303],"category_scores_gemma":[0.002405999,0.0006385977,0.0006056836,0.0006812597,0.0004135441,0.0004953234,0.0006497697,0.001184326,0.001114147],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002842016,"about_ca_system_score_gemma":0.0007867357,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008811716,"about_ca_topic_score_gemma":0.001643502,"domain_scores_codex":[0.9971797,0.0005133045,0.0002137649,0.0007057053,0.001189883,0.00019756],"domain_scores_gemma":[0.9987798,0.000375212,0.0001830707,0.000108883,0.0004393254,0.0001135876],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002637307,0.00026923,0.01401122,0.0001741117,0.00007322476,0.000233225,0.0001383388,0.0007260281,0.9238206,0.0003816455,0.0006995294,0.05920903],"study_design_scores_gemma":[0.00006012628,0.001902966,0.03673612,0.0001339945,0.0002785763,0.003047755,0.0002223893,0.0251456,0.9142478,0.0006010728,0.01748303,0.0001405581],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5894465,0.008582572,0.3804188,0.001467437,0.001483898,0.002373548,0.003459445,0.002054156,0.01071357],"genre_scores_gemma":[0.6272645,0.002854484,0.3575768,0.000823271,0.0001987192,0.001034052,0.002241066,0.00009655647,0.007910418],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001923473,"threshold_uncertainty_score":0.01017243,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02022419009099818,"score_gpt":0.2848449412801812,"score_spread":0.264620751189183,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}