{"id":"W4318579491","doi":"10.1371/journal.ppat.1011100","title":"Verticillium dahliae Vta3 promotes ELV1 virulence factor gene expression in xylem sap, but tames Mtf1-mediated late stages of fungus-plant interactions and microsclerotia formation","year":2023,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Göttinger Graduiertenschule für Neurowissenschaften, Biophysik und Molekulare Biowissenschaften; Deutsche Forschungsgemeinschaft; Canadian Institute for Advanced Research","keywords":"Verticillium dahliae; Biology; Virulence; Verticillium wilt; Effector; Gene; Conidiation; Verticillium; Microbiology; Genetics; Cell biology; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001071589,0.0001504544,0.0002015798,0.00006349333,0.0001660635,0.00005199796,0.0001459675,0.00007598859,0.0001486213],"category_scores_gemma":[0.0001335288,0.00007177831,0.00004996041,0.000309324,0.00004641871,0.0003882886,0.0001119804,0.0001786147,0.00005836479],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003279527,"about_ca_system_score_gemma":0.000008549125,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002171874,"about_ca_topic_score_gemma":0.0006223634,"domain_scores_codex":[0.998948,0.0001064159,0.0003374037,0.0002149845,0.0001301789,0.0002629922],"domain_scores_gemma":[0.9993204,0.0003123925,0.0001501371,0.00007861704,0.00007192388,0.00006649824],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003071857,0.0001522866,0.01798379,0.00002527139,0.00001034677,0.000005926005,0.0004858878,0.000004566882,0.9796284,7.515828e-7,0.00008968679,0.00158233],"study_design_scores_gemma":[0.0001172689,0.00009530037,0.2970666,0.0001669018,0.000008898208,0.000007925861,0.000467494,0.0008299365,0.7008054,0.00001050089,0.0002990976,0.0001246052],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960684,0.00006709518,0.000004951352,0.00015054,0.0001061865,0.0002467851,0.003252048,0.00007940182,0.00002459869],"genre_scores_gemma":[0.9984325,0.0005486073,0.000140708,0.00002947029,0.00003061854,0.00002499319,0.0006754298,0.000002159538,0.0001154967],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2790828,"threshold_uncertainty_score":0.2927034,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03594409357990993,"score_gpt":0.2296681517602484,"score_spread":0.1937240581803385,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}