{"id":"W4319066839","doi":"10.1080/00275514.2022.2157665","title":"Mitochondrial genomes in the iconic reindeer lichens: Architecture, variation, and synteny across multiple evolutionary scales","year":2023,"lang":"en","type":"article","venue":"Mycologia","topic":"Lichen and fungal ecology","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Museum of Nature","funders":"National Science Foundation","keywords":"Biology; Synteny; Lichen; Evolutionary biology; Variation (astronomy); Genome; Mitochondrial DNA; Phylogenetics; Ecology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001159303,0.000191062,0.0001571105,0.001401562,0.0003325729,0.0005130764,0.0001570783,0.0002472913,0.0009020821],"category_scores_gemma":[0.0003745799,0.0001119178,0.0002219717,0.001114336,0.0002070918,0.0003076169,0.0004457858,0.0001678333,0.0002219086],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002711714,"about_ca_system_score_gemma":0.0001807244,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003064909,"about_ca_topic_score_gemma":0.008648478,"domain_scores_codex":[0.9998615,0.00001058013,0.00001014924,0.0000695014,0.00002004572,0.00002830196],"domain_scores_gemma":[0.9996985,0.00005122942,0.0001266743,0.00003649983,0.00003883927,0.00004829281],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004070397,0.00003591388,0.2242636,0.0002399833,0.0001363586,0.00020871,0.002069391,0.0006469146,0.7381986,0.0005474759,0.0001707608,0.03307516],"study_design_scores_gemma":[0.000002231663,0.00003618709,0.9935403,0.00002565956,0.00003571417,0.0001941484,0.0003033016,0.0003195427,0.00390175,0.00007085021,0.001563329,0.000007085227],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997636,0.0005683815,0.0003192745,0.00001610973,0.000001290053,0.000003126155,0.0008368355,0.00001281605,0.0006061427],"genre_scores_gemma":[0.9958826,0.0003250249,0.0009913875,0.00002906015,0.000002570582,0.0000103806,0.002265495,0.000009785515,0.0004837008],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003064909,"threshold_uncertainty_score":0.006094098,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01775826038469212,"score_gpt":0.231056722590334,"score_spread":0.2132984622056419,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}