{"id":"W4319332881","doi":"10.1128/msphere.00022-23","title":"mSphere of Influence: Deterministic and Stochastic Processes Drive Microbial Evolution","year":2023,"lang":"en","type":"article","venue":"mSphere","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada; Canadian Institute for Advanced Research","keywords":"Microbial genetics; Biology; Evolutionary biology; Field (mathematics); Biochemical engineering; Genetics; Mathematics; Gene; Engineering","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00220801,0.0003426814,0.0006335449,0.0006222643,0.001034909,0.003119666,0.0008095811,0.00178365,0.003445577],"category_scores_gemma":[0.01522542,0.0002879172,0.0007427676,0.000491159,0.00537188,0.004473531,0.002042233,0.002862476,0.0005501481],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001430876,"about_ca_system_score_gemma":0.0005942343,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002167627,"about_ca_topic_score_gemma":0.001791544,"domain_scores_codex":[0.9989622,0.0004710402,0.00002518815,0.000228171,0.0002414211,0.00007201829],"domain_scores_gemma":[0.991778,0.00669019,0.0004852408,0.0004148866,0.000280702,0.0003510405],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"observational","study_design_scores_codex":[0.00006439699,0.0000175558,0.003820799,0.00007284897,0.0000909614,0.0001492342,0.0009677257,0.01323727,0.001589375,0.9445466,0.006424612,0.02901868],"study_design_scores_gemma":[0.00001522615,0.00002458505,0.001457701,0.00002862463,0.00002452477,0.0001245783,0.0001514582,0.02956043,0.0007824805,0.9464929,0.02129852,0.00003908559],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.2076735,0.02841275,0.5002112,0.1365401,0.003414548,0.00004316014,0.0002914605,0.0007427922,0.1226705],"genre_scores_gemma":[0.9653772,0.004702932,0.01662445,0.003626029,0.001565292,0.00002544612,0.00004530607,0.0001768925,0.007856569],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.003445577,"threshold_uncertainty_score":0.01167721,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004228039415716257,"score_gpt":0.2304478932011114,"score_spread":0.2262198537853951,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}