{"id":"W4319334144","doi":"10.1073/pnas.2201076120","title":"Divergent sensory and immune gene evolution in sea turtles with contrasting demographic and life histories","year":2023,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Turtle Biology and Conservation","field":"Environmental Science","cited_by":52,"is_retracted":false,"has_abstract":true,"ca_institutions":"Royal Ontario Museum","funders":"Pacific Islands Fisheries Science Center; Southwest Fisheries Science Center; U.S. National Library of Medicine; Comisión Nacional de Investigación Científica y Tecnológica; University of Massachusetts Amherst; Directorate for Biological Sciences; National Institutes of Health; Horizon 2020 Framework Programme; Ruppin Academic Center; Fundación Bancaria Caixa d'Estalvis i Pensions de Barcelona; Centro Interdisciplinar de Investigação Marinha e Ambiental; University of California, Los Angeles; Universidade do Porto; “la Caixa” Foundation; Max-Planck-Gesellschaft; Vienna Science and Technology Fund; School of Life and Environmental Sciences, Deakin University; Universitat Autònoma de Barcelona; Deakin University; Deutsche Forschungsgemeinschaft; National Oceanic and Atmospheric Administration; Technische Universität Dresden; Generalitat de Catalunya; Bundesministerium für Bildung und Forschung; Universitat Pompeu Fabra; University of Otago; University of Haifa; University of Florida; European Commission; Uppsala Universitet; Johns Hopkins University; U.S. Fish and Wildlife Service; Sea Turtle Conservancy; Ocean Foundation; Universidade Estadual de Campinas; Fundação de Amparo à Pesquisa do Estado de São Paulo; Deutscher Akademischer Austauschdienst; U.S. Geological Survey; University of East Anglia; Universität Wien; Howard Hughes Medical Institute; Science for Life Laboratory; National Science Foundation","keywords":"Biology; Vertebrate; Ecology; Population; Lineage (genetic); Adaptation (eye); Evolutionary biology; Turtle (robot); Sea turtle; Zoology; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001760898,0.0001755434,0.0001484241,0.0007492201,0.000182744,0.0002934098,0.0001489079,0.0002002482,0.0006395732],"category_scores_gemma":[0.0003012688,0.0000946833,0.0002401265,0.0003284897,0.0002471162,0.0001540337,0.0003317865,0.000231888,0.0001392603],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001465727,"about_ca_system_score_gemma":0.00008612425,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009859763,"about_ca_topic_score_gemma":0.00201786,"domain_scores_codex":[0.9998854,0.00001842591,0.000006910363,0.0000473722,0.00001434062,0.00002758628],"domain_scores_gemma":[0.999824,0.00002837771,0.00006829035,0.00001176892,0.00002801721,0.00003956384],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000526109,0.0000588678,0.5778329,0.000089079,0.0002416237,0.0006356423,0.001517381,0.0003953211,0.4045052,0.0002791719,0.000193565,0.01372508],"study_design_scores_gemma":[0.000004103812,0.00006920529,0.9970565,0.000005586707,0.00003530783,0.0003376097,0.0002278931,0.0002865191,0.001494094,0.00006546255,0.0004111491,0.00000661357],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9995615,0.0001093171,0.0001249666,0.000006871984,0.000001493937,9.116814e-7,0.0001023369,0.000003724927,0.00008882621],"genre_scores_gemma":[0.9990062,0.00005653553,0.0002055912,0.00002613066,0.000002404593,0.000004297902,0.0005142752,0.00000554949,0.0001789356],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009859763,"threshold_uncertainty_score":0.002139628,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02350513302422165,"score_gpt":0.2329955952817056,"score_spread":0.2094904622574839,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}