{"id":"W4319767204","doi":"10.3389/fgene.2023.1110463","title":"Genome wide association study of thyroid hormone levels following challenge with porcine reproductive and respiratory syndrome virus","year":2023,"lang":"en","type":"article","venue":"Frontiers in Genetics","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"National Institute of Food and Agriculture; Genome Canada; U.S. Department of Agriculture","keywords":"Porcine reproductive and respiratory syndrome virus; Biology; Quantitative trait locus; Single-nucleotide polymorphism; Fetus; Pregnancy; SNP; Physiology; Genetics; Virus; Genotype; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004349627,0.0001168779,0.0002583398,0.00004988588,0.0001466739,0.00001168677,0.00009125435,0.000062459,0.00000221706],"category_scores_gemma":[0.0001328301,0.00005636357,0.00002848308,0.0006158504,0.00003953859,0.00005540049,0.0001013923,0.0001021447,0.000002501448],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008547997,"about_ca_system_score_gemma":0.00000567092,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008067327,"about_ca_topic_score_gemma":0.0004687362,"domain_scores_codex":[0.998939,0.0000861672,0.0002169939,0.0003253471,0.0002263845,0.0002060988],"domain_scores_gemma":[0.999624,0.00008587348,0.0001291509,0.00007330454,0.00005781463,0.00002983394],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00003563442,0.000145837,0.9775333,0.000003720812,0.0001254522,0.00002280912,0.001218734,0.00006582945,0.01934996,0.000001246352,0.0003348852,0.001162584],"study_design_scores_gemma":[0.0003036831,0.002198204,0.9911161,0.000006641711,0.00003350285,5.712834e-7,0.005348619,0.000007090423,0.0001890761,0.0001376604,0.0005364001,0.0001224311],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960333,0.00308497,0.000007447149,0.0001718529,0.0001286304,0.0003837066,0.00001744728,0.00004308477,0.0001296162],"genre_scores_gemma":[0.9990807,0.0004927269,0.0001900442,0.0000217649,0.00005176288,0.000028384,0.000003304082,0.000002209916,0.000129107],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01916089,"threshold_uncertainty_score":0.229844,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03136295393511052,"score_gpt":0.2348771259117323,"score_spread":0.2035141719766218,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}