{"id":"W4320032971","doi":"10.1093/nar/gkad075","title":"Recipient UvrD helicase is involved in single- to double-stranded DNA conversion during conjugative plasmid transfer","year":2023,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; China Scholarship Council; Fondation pour la Recherche Médicale; Keio University; Agence Nationale de la Recherche","keywords":"Biology; Plasmid; Horizontal gene transfer; DNA; Transposable element; Genetics; Gene; Escherichia coli; Cell biology; Genome; Molecular biology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000258877,0.0004162918,0.0003878884,0.0002583966,0.0002017094,0.0004968444,0.0002273711,0.0004094949,0.001067448],"category_scores_gemma":[0.0002958321,0.0001766695,0.0002612135,0.0001579585,0.0002264486,0.0002697781,0.0003143417,0.000444464,0.000536005],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002547714,"about_ca_system_score_gemma":0.0002550551,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003515836,"about_ca_topic_score_gemma":0.0002677471,"domain_scores_codex":[0.9997384,0.00004417465,0.00002624335,0.00007518239,0.00007222687,0.00004385225],"domain_scores_gemma":[0.9997987,0.00002956529,0.00005851611,0.00004710766,0.00002512207,0.00004100935],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002717619,0.00001128157,0.0003912998,0.00001795738,0.000002334659,0.00005635781,0.00001121396,0.00001715691,0.998044,0.00007847179,0.00001051071,0.001332251],"study_design_scores_gemma":[0.000002886394,0.00005124855,0.004850538,0.000004214628,0.000007568135,0.0003720113,0.0000195418,0.0004610831,0.9926156,0.00005318664,0.001558486,0.000003713388],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.983895,0.001590555,0.01278333,0.00008708259,0.00004346584,0.00002723473,0.0001882384,0.0001885222,0.001196492],"genre_scores_gemma":[0.9935707,0.0004066869,0.002765113,0.00002055449,0.000004819321,0.00001364195,0.0002383015,0.00002819689,0.002952074],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001067448,"threshold_uncertainty_score":0.003571033,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05953167160202866,"score_gpt":0.3195882870765682,"score_spread":0.2600566154745395,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}