{"id":"W4320482733","doi":"10.1139/gen-2022-0086","title":"<i>Aeromonas salmonicida</i> isolates from Canada demonstrate wide distribution and clustering among mesophilic strains","year":2023,"lang":"en","type":"article","venue":"Genome","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec","funders":"","keywords":"Psychrophile; Biology; Mesophile; Aeromonas salmonicida; Subspecies; Microbiology; Aeromonas; Clade; Phylogenetic tree; Virulence; Phylogenetics; Zoology; Bacteria; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":true,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009367208,0.0003547049,0.0002771438,0.00132786,0.001499363,0.0008028414,0.0003407692,0.0002933784,0.002088064],"category_scores_gemma":[0.0003259771,0.0001450941,0.0002434535,0.001724702,0.0004050279,0.0001374758,0.0004813087,0.0003138037,0.0005034397],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.003534141,"about_ca_system_score_gemma":0.004460011,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.8997129,"about_ca_topic_score_gemma":0.9442521,"domain_scores_codex":[0.99967,0.000008010644,0.00001796637,0.00008474231,0.0001148361,0.0001044077],"domain_scores_gemma":[0.9994778,0.00002111515,0.00007742892,0.00002157057,0.0002729566,0.0001291357],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005099264,0.0001219949,0.6936405,0.0003557561,0.0001031883,0.001073547,0.002385462,0.0004330288,0.2633519,0.0003915157,0.003843248,0.03378991],"study_design_scores_gemma":[0.000006295738,0.00006881856,0.9787689,0.00003882331,0.00002696828,0.0005138614,0.00158992,0.0002348766,0.009649462,0.00002880875,0.009049836,0.0000234253],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9868241,0.001001461,0.0004201085,0.0001530576,0.00001321634,0.00004911643,0.00563506,0.00006398199,0.005839784],"genre_scores_gemma":[0.9878681,0.0006241427,0.001287809,0.0001423952,0.000005709589,0.00002203361,0.006749857,0.00001891383,0.003281096],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1002871,"threshold_uncertainty_score":0.2017555,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009673904512742517,"score_gpt":0.2239022916546586,"score_spread":0.2142283871419161,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}