{"id":"W4320490578","doi":"10.1128/mra.01274-22","title":"Genome Sequences of Alkalihalobacillus clausii, Bacillus safensis, Escherichia coli, and Pasteurella multocida Isolates from the Rumen, Nasopharynx, Vagina, and Uterus of Healthy Beef Cattle","year":2023,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"North Dakota Agricultural Experiment Station","keywords":"Pasteurella multocida; Biology; Microbiology; Escherichia coli; Bacillus (shape); Vagina; Genome; Bacteria; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005139958,0.0003002866,0.0005701258,0.0001574644,0.0004243983,0.00002374168,0.0003156863,0.0003330834,0.0003053065],"category_scores_gemma":[0.00006646381,0.0002302776,0.00009527031,0.0004014429,0.001370001,0.00006108493,0.0004732388,0.0003348749,0.0001304644],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003976946,"about_ca_system_score_gemma":0.0001131132,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001561462,"about_ca_topic_score_gemma":0.0001351784,"domain_scores_codex":[0.9976966,0.0005171544,0.0005689483,0.0005613381,0.00004312711,0.0006127896],"domain_scores_gemma":[0.9986341,0.0003906738,0.0003370375,0.0004089464,0.0001622384,0.00006702959],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003767016,0.0001311987,0.01140726,0.00006758152,0.0004515948,0.000005027096,0.001001534,0.00001336059,0.9817713,0.00002722197,0.004000924,0.0007462706],"study_design_scores_gemma":[0.007847482,0.002241952,0.03092546,0.0002412345,0.000396226,0.000189654,0.004535797,0.00001931051,0.07688112,0.0002261552,0.8755712,0.0009244226],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9679386,0.0249475,0.00001606259,0.0007711079,0.000197225,0.0005415315,0.005422282,0.00004380114,0.0001218747],"genre_scores_gemma":[0.9931086,0.002563476,0.00004850721,0.0005508754,0.00004120757,0.00003459227,0.002911534,0.00002453172,0.0007166812],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9048902,"threshold_uncertainty_score":0.9390449,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01820227774281765,"score_gpt":0.2588489842156453,"score_spread":0.2406467064728277,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}