{"id":"W4320496604","doi":"10.3390/ijms24043696","title":"Genomic SELEX Reveals Pervasive Role of the Flagella Master Regulator FlhDC in Carbon Metabolism","year":2023,"lang":"en","type":"article","venue":"International Journal of Molecular Sciences","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; Japan Society for the Promotion of Science; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Flagellum; Regulator; Biology; Gene; PEP group translocation; Cell biology; Regulation of gene expression; Transcriptional regulation; Genetics; Gene expression; Escherichia coli","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004259358,0.0004621849,0.000486071,0.0003020574,0.0002149746,0.0007434941,0.00029315,0.0003090382,0.001241076],"category_scores_gemma":[0.0003880929,0.0001445264,0.0002940951,0.0003591829,0.0002787949,0.0002198148,0.0005715676,0.0006747925,0.0004016495],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002521081,"about_ca_system_score_gemma":0.0003561978,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005800616,"about_ca_topic_score_gemma":0.001384568,"domain_scores_codex":[0.9998305,0.00002327331,0.00001273475,0.00003651033,0.00006021068,0.00003673872],"domain_scores_gemma":[0.9998585,0.0000557367,0.00001930748,0.00001992566,0.00001664021,0.00002987633],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001745451,0.00006732067,0.001732473,0.00007456923,0.00002753996,0.0002958144,0.00004039593,0.0006902484,0.9876145,0.0002472312,0.0001554924,0.008879819],"study_design_scores_gemma":[0.00002328839,0.0002160402,0.0119771,0.00001899402,0.0000700388,0.0005352174,0.0001544728,0.005803707,0.9759089,0.0002510737,0.005019587,0.00002160716],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9829835,0.0008101906,0.01154366,0.0002983112,0.00003806581,0.00005225147,0.00130739,0.0002702718,0.002696289],"genre_scores_gemma":[0.9829497,0.0007546525,0.009420015,0.0003177373,0.000008655801,0.00003771948,0.002776894,0.0001051005,0.003629452],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001241076,"threshold_uncertainty_score":0.004151881,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008939490785466447,"score_gpt":0.2386094814184372,"score_spread":0.2296699906329707,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}