{"id":"W4320717613","doi":"10.1016/j.ygeno.2023.110581","title":"Metabolomic and transcriptomic profiles after immune stimulation in the zebrafish testes","year":2023,"lang":"en","type":"article","venue":"Genomics","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Consejo Superior de Investigaciones Científicas; Natural Sciences and Engineering Research Council of Canada; Ministerio de Ciencia e Innovación","keywords":"Biology; Metabolome; Transcriptome; Metabolomics; Immune system; Zebrafish; Metabolite; Gene; Genetics; Gene expression; Biochemistry; Bioinformatics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009639253,0.0002568822,0.0002866283,0.0004067266,0.0001879798,0.0002580372,0.0000881947,0.0001719563,0.001085826],"category_scores_gemma":[0.00009697955,0.0001165139,0.0003337506,0.000284757,0.0001799765,0.0001617861,0.0002617814,0.0003140802,0.0001662485],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002572541,"about_ca_system_score_gemma":0.0003294086,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002752416,"about_ca_topic_score_gemma":0.005335234,"domain_scores_codex":[0.9999464,0.000003616179,0.000002752687,0.00001791907,0.00001744395,0.00001193581],"domain_scores_gemma":[0.9999518,0.000005133492,0.0000144757,0.000002715883,0.0000136204,0.00001232123],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001452841,0.000006613698,0.002211853,0.00003747168,0.000009942112,0.0000488224,0.00003414866,0.00003508964,0.9963267,0.00002059661,0.00003732788,0.001086085],"study_design_scores_gemma":[0.00003269661,0.0007987664,0.6194595,0.00003924121,0.0001582156,0.0003501616,0.0005024085,0.001415454,0.3732013,0.0002058478,0.00378939,0.00004711632],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9900185,0.0009099742,0.001385458,0.00008702154,0.00002122775,0.00003885992,0.006392033,0.00003742268,0.001109532],"genre_scores_gemma":[0.982556,0.0009931789,0.003740557,0.0002302114,0.00001222001,0.0001383363,0.006318688,0.00004082845,0.005970065],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002752416,"threshold_uncertainty_score":0.005472779,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009164534926809092,"score_gpt":0.2142453166483407,"score_spread":0.2050807817215316,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}