{"id":"W4321004943","doi":"10.1016/j.hal.2023.102405","title":"Genomic characterization of coexisting anatoxin-producing and non-toxigenic Microcoleus subspecies in benthic mats from the Wolastoq, New Brunswick, Canada","year":2023,"lang":"en","type":"article","venue":"Harmful Algae","topic":"Aquatic Ecosystems and Phytoplankton Dynamics","field":"Environmental Science","cited_by":17,"is_retracted":false,"has_abstract":true,"ca_institutions":"National Research Council Canada; University of New Brunswick","funders":"Environment and Climate Change Canada","keywords":"Biology; Subspecies; Microbial mat; Benthic zone; Cyanobacteria; Axenic; Botany; Metagenomics; Ecology; Gene; Bacteria; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003019451,0.0001274855,0.0001842284,0.00002760872,0.0001062266,0.00002992251,0.0001976736,0.0000429998,0.0002499322],"category_scores_gemma":[0.00003456532,0.0001097198,0.00002173777,0.0003035456,0.00005793973,0.00007911676,0.0001642458,0.0001184362,0.00005255373],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001844419,"about_ca_system_score_gemma":0.0002103137,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.6566732,"about_ca_topic_score_gemma":0.8927218,"domain_scores_codex":[0.9989453,0.00004966088,0.0003198179,0.0002833767,0.000166953,0.0002348877],"domain_scores_gemma":[0.9994027,0.0001258178,0.0001690011,0.0002302441,0.00000597923,0.00006626741],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00001115305,0.00000859926,0.8031311,0.00002381182,0.00001379566,0.000008590665,0.002491273,0.0006358188,0.190578,0.0000459366,0.0004917876,0.002560115],"study_design_scores_gemma":[0.0001961642,0.000006982315,0.9870319,0.00005382062,0.000007492085,0.000002906874,0.0002744588,0.008393521,0.002601167,0.00005018747,0.001261003,0.0001203753],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988471,0.00004543865,0.000132,0.0002667468,0.0001582289,0.000288998,0.00004951966,0.00001514131,0.0001968864],"genre_scores_gemma":[0.9991679,0.00004853592,0.0001077839,0.0001130738,0.00006497461,0.000004355029,0.00007236513,0.00001672138,0.0004042496],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2360486,"threshold_uncertainty_score":0.4474246,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00951805561614886,"score_gpt":0.1972816373506884,"score_spread":0.1877635817345396,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}