{"id":"W4321095471","doi":"10.3390/plants12040881","title":"Untargeted Metabolomics for Integrative Taxonomy: Metabolomics, DNA Marker-Based Sequencing, and Phenotype Bioimaging","year":2023,"lang":"en","type":"article","venue":"Plants","topic":"Bryophyte Studies and Records","field":"Agricultural and Biological Sciences","cited_by":20,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of New Brunswick","funders":"Natural Sciences and Engineering Research Council of Canada; Deutsche Forschungsgemeinschaft","keywords":"Metabolomics; Biology; Phylogenetic tree; DNA sequencing; Computational biology; Molecular marker; Chemotaxonomy; Clade; Phylogenetics; Taxon; Taxonomy (biology); DNA; Evolutionary biology; Gene; Genetics; Bioinformatics; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007794035,0.0009764675,0.000687436,0.001069006,0.0002463841,0.001043605,0.0005410036,0.0007743805,0.000883569],"category_scores_gemma":[0.0009209377,0.0003494276,0.0005970775,0.0008428732,0.0005147981,0.0009880969,0.001007224,0.001082863,0.0007199823],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003621653,"about_ca_system_score_gemma":0.0003622647,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004362314,"about_ca_topic_score_gemma":0.001045704,"domain_scores_codex":[0.9992818,0.0001215218,0.00005061631,0.0002889257,0.0001961792,0.00006087167],"domain_scores_gemma":[0.9991114,0.0002223451,0.0002867929,0.0001605405,0.0001497439,0.00006920838],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003085328,0.00001580434,0.0006818828,0.00008071517,0.00001175508,0.00002810923,0.00002653712,0.00009817421,0.9908444,0.000142579,0.00003244362,0.008006672],"study_design_scores_gemma":[0.00001601398,0.0003227463,0.02352558,0.00004078726,0.00007678854,0.0004646828,0.0001036482,0.00676734,0.9601665,0.001155726,0.007313936,0.0000461329],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.4413531,0.004261355,0.5411736,0.0005277117,0.0001699451,0.0004647483,0.005644444,0.002775053,0.003629975],"genre_scores_gemma":[0.4323028,0.003188703,0.5521432,0.0006832757,0.00007642359,0.0007591464,0.006303682,0.0007260023,0.003816861],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.001069006,"threshold_uncertainty_score":0.004121959,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04456883182051279,"score_gpt":0.2325162503050854,"score_spread":0.1879474184845726,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}