{"id":"W4321748423","doi":"10.1080/19490976.2023.2180317","title":"Actively replicating gut bacteria identified by 5-ethynyl-2’-deoxyuridine (EdU) click chemistry and cell sorting","year":2023,"lang":"en","type":"article","venue":"Gut Microbes","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; McGill University Health Centre; Kenneth Rainin Foundation; McGill University","keywords":"Bacteria; Biology; Cell sorting; Click chemistry; Gut flora; Microbiology; Bacterial cell structure; Microbial metabolism; Genetics; Cell; Biochemistry; Chemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007624726,0.0006466395,0.0005001547,0.0007542036,0.0004010369,0.0006128162,0.0004007902,0.0008814062,0.001778678],"category_scores_gemma":[0.000607055,0.0003503831,0.0004135453,0.0004716289,0.0004833805,0.0004227576,0.0006375074,0.001002023,0.001240116],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002964957,"about_ca_system_score_gemma":0.0002701933,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005015525,"about_ca_topic_score_gemma":0.001220831,"domain_scores_codex":[0.9995424,0.00006252345,0.00002977474,0.000120255,0.0001577465,0.00008739464],"domain_scores_gemma":[0.9995503,0.0001389348,0.00009757392,0.00005916572,0.0000998244,0.00005410723],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002665577,0.000009492487,0.0002854329,0.00005524875,0.000003426632,0.00003010946,0.00002658474,0.00006414421,0.9970825,0.000145143,0.00008568574,0.00218555],"study_design_scores_gemma":[0.000004786992,0.00008792136,0.002242063,0.00001327539,0.000009413429,0.0001329016,0.00002933689,0.002368889,0.9913844,0.0001146616,0.003600436,0.00001179905],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7667147,0.002947017,0.217989,0.0004626973,0.0002177544,0.0004260197,0.002684681,0.002432756,0.006125527],"genre_scores_gemma":[0.7239004,0.004101309,0.2560152,0.0005292757,0.000056682,0.0008625517,0.004762055,0.0005130038,0.009259621],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001778678,"threshold_uncertainty_score":0.005950332,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008372190839518684,"score_gpt":0.2537403078186857,"score_spread":0.245368116979167,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}