{"id":"W4321786632","doi":"10.15698/mic2023.03.793","title":"D-Serine reduces the expression of the cytopathic genotoxin colibactin","year":2023,"lang":"en","type":"article","venue":"Microbial Cell","topic":"Amino Acid Enzymes and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"Biotechnology and Biological Sciences Research Council; Agence Nationale de la Recherche; University of Glasgow; University of Stirling; Wellcome Trust","keywords":"Serine; Cell biology; Chemistry; Biology; Phosphorylation","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001079625,0.000333139,0.0002377334,0.0001436696,0.00006314821,0.0002406713,0.000161118,0.0002412638,0.001013919],"category_scores_gemma":[0.0001460003,0.0001105445,0.0001686153,0.0001152298,0.0001599978,0.0001127733,0.0001706461,0.0003342786,0.0002195703],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002071759,"about_ca_system_score_gemma":0.0001839138,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008988857,"about_ca_topic_score_gemma":0.001252311,"domain_scores_codex":[0.9998498,0.00003561957,0.00002264785,0.00002178802,0.0000356192,0.00003446377],"domain_scores_gemma":[0.9998034,0.00004657909,0.0000529826,0.00002706071,0.00002464519,0.00004533839],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007843356,0.00001761983,0.00006824661,0.00001238467,0.000001509145,0.00001012758,0.000004935576,0.00001238936,0.9995565,0.000008195489,0.000006440693,0.0002232647],"study_design_scores_gemma":[0.000006208713,0.0004636678,0.00240563,0.000003031905,0.000005312848,0.0000561515,0.00002050208,0.0001966684,0.9963755,0.000005653594,0.0004600442,0.00000157747],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980102,0.0005119081,0.0004414927,0.00005233326,0.00001184919,0.00001776235,0.0001809418,0.00002418296,0.0007492653],"genre_scores_gemma":[0.9961038,0.0004402799,0.0009144366,0.00004876885,0.000005087325,0.0000160328,0.0003968903,0.00001509838,0.002059633],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001013919,"threshold_uncertainty_score":0.003391862,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006435101188228747,"score_gpt":0.2072276631380866,"score_spread":0.2007925619498578,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}