{"id":"W4321786775","doi":"10.3390/microorganisms11030563","title":"Avian Malaria Parasites Modulate Gut Microbiome Assembly in Canaries","year":2023,"lang":"en","type":"article","venue":"Microorganisms","topic":"Bird parasitology and diseases","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Collectivité de Corse; Lietuvos Mokslo Taryba; Agence Nationale de la Recherche","keywords":"Microbiome; Biology; Dysbiosis; Malaria; Plasmodium (life cycle); Avian malaria; Host (biology); Parasite hosting; Zoology; Immunology; Plasmodium falciparum; Ecology; Genetics; Gametocyte","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002233491,0.0002948375,0.0003970661,0.0003817529,0.0002698193,0.00003588937,0.0003749564,0.0005102686,0.001015912],"category_scores_gemma":[0.00006542037,0.000292325,0.0001264837,0.0006968229,0.0003297401,0.0001243517,0.0001461213,0.0003353521,0.01140778],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005665516,"about_ca_system_score_gemma":0.0001245509,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000853289,"about_ca_topic_score_gemma":0.001279559,"domain_scores_codex":[0.9980986,0.0002075688,0.0003658546,0.0005085935,0.00003077469,0.000788598],"domain_scores_gemma":[0.9992973,0.0001335445,0.0000870445,0.0003903409,0.00004242185,0.00004937267],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00007937282,0.00009271262,0.1111174,0.00001566108,0.0001113165,0.0001359756,0.0004332385,0.00001156473,0.8732012,0.001118665,0.01340917,0.000273742],"study_design_scores_gemma":[0.001228626,0.00006422622,0.6212298,0.00002941896,0.00005270949,0.0001549435,0.0002645309,0.000002873379,0.363698,0.0009878983,0.01189456,0.0003924005],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9939939,0.002069584,0.00002410873,0.001572891,0.0009834622,0.000239946,0.0001103594,0.0003962631,0.0006094461],"genre_scores_gemma":[0.9928488,0.00005544754,0.00008138052,0.0005612506,0.00003349896,0.00002601039,0.0005647778,0.00004226909,0.005786564],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5101125,"threshold_uncertainty_score":0.9999529,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01133107904701919,"score_gpt":0.2483271346600414,"score_spread":0.2369960556130223,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}