{"id":"W4322703297","doi":"10.12688/f1000research.2-191.v2","title":"taxize: taxonomic search and retrieval in R","year":2013,"lang":"en","type":"preprint","venue":"F1000Research","topic":"Species Distribution and Climate Change","field":"Environmental Science","cited_by":270,"is_retracted":false,"has_abstract":true,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Workflow; Computer science; Suite; Index (typography); World Wide Web; Information retrieval; Open source; Software; Database; Geography; Programming language","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006422873,0.003790221,0.003538362,0.004582983,0.001535354,0.005896975,0.007329572,0.002067646,0.1362598],"category_scores_gemma":[0.04102084,0.002796374,0.00396185,0.0057012,0.001788939,0.005602455,0.00549514,0.004907999,0.1396368],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002025176,"about_ca_system_score_gemma":0.005518485,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006510725,"about_ca_topic_score_gemma":0.00846819,"domain_scores_codex":[0.9949352,0.001689841,0.0006372137,0.001201633,0.001163925,0.0003722429],"domain_scores_gemma":[0.9913264,0.004753782,0.0006829373,0.001764327,0.00110844,0.0003640097],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003180849,0.00003202278,0.0008127912,0.002260169,0.0003897267,0.0002086533,0.000272312,0.003213038,0.001895869,0.01532413,0.9181136,0.05715958],"study_design_scores_gemma":[0.001083661,0.00006243227,0.001986103,0.0006746316,0.0002807695,0.000578044,0.0002531347,0.04517794,0.01085185,0.1298415,0.8088296,0.0003803257],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"software","genre_gemma":"software","genre_scores_codex":[0.0009690234,0.001050407,0.3650855,0.001802586,0.0006923426,0.0006188013,0.115266,0.5065123,0.00800301],"genre_scores_gemma":[0.02252303,0.001747611,0.5991346,0.00234154,0.00034054,0.005562223,0.1489803,0.2090658,0.01030419],"genre_candidate":"software","genre_consensus":"software","teacher_disagreement_score":0.1362598,"threshold_uncertainty_score":0.4558345,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08438135792045386,"score_gpt":0.3185390967279377,"score_spread":0.2341577388074839,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}