{"id":"W4322757900","doi":"10.1080/17435390.2023.2180451","title":"A comprehensive proteomics analysis of the response of <i>Pseudomonas aeruginosa</i> to nanoceria cytotoxicity","year":2023,"lang":"en","type":"article","venue":"Nanotoxicology","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"","keywords":"Pyocyanin; Pseudomonas aeruginosa; Pyoverdine; Proteomics; Biochemistry; Biology; Extracellular; Chemistry; Bacterial outer membrane; Microbiology; Cell biology; Quorum sensing; Bacteria; Virulence","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001276097,0.000351145,0.000297029,0.0002734788,0.0001870183,0.0002299389,0.0001305143,0.0003035612,0.0006500107],"category_scores_gemma":[0.000167654,0.0001309482,0.0003359029,0.000289876,0.0001691543,0.0002007257,0.0001960749,0.0003206072,0.0002438663],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002089761,"about_ca_system_score_gemma":0.0002082831,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001281677,"about_ca_topic_score_gemma":0.001444448,"domain_scores_codex":[0.9998409,0.00001199629,0.0000102822,0.00004644129,0.00006398479,0.00002643852],"domain_scores_gemma":[0.999892,0.00001763585,0.0000264283,0.00001111945,0.00003900847,0.00001383612],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002082925,0.000003748842,0.0001256473,0.00001761831,0.000002123516,0.0000133841,0.000005694586,0.00002390572,0.9993793,0.000004844372,0.0000126761,0.0003901962],"study_design_scores_gemma":[0.000003627512,0.0002546941,0.03063957,0.000009146434,0.00002715297,0.0002384157,0.0000870813,0.001141616,0.9655124,0.00004876291,0.002023032,0.00001453086],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.990511,0.0009968524,0.00479485,0.0001267538,0.0000247989,0.00005392406,0.001939981,0.000130992,0.001420834],"genre_scores_gemma":[0.9809786,0.001793005,0.008960573,0.0002561249,0.00001768064,0.0001477015,0.003123699,0.00005297283,0.004669657],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001281677,"threshold_uncertainty_score":0.002548456,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01585325651921493,"score_gpt":0.2665358487289003,"score_spread":0.2506825922096854,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}