{"id":"W4323046805","doi":"10.3390/microorganisms11030648","title":"Genomic Characterization and Wetland Occurrence of a Novel Campylobacter Isolate from Canada Geese","year":2023,"lang":"en","type":"article","venue":"Microorganisms","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Oak Ridge Institute for Science and Education; Office of Research and Development; U.S. Environmental Protection Agency; U.S. Department of Energy","keywords":"Campylobacter; Biology; Goose; Waterfowl; Feces; Virulence; Clade; Zoology; Microbiology; Ecology; Gene; Genetics; Phylogenetics; Bacteria; Habitat","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001035201,0.000126075,0.0002187072,0.0000107323,0.0000760418,0.00001918685,0.0001599911,0.00008274811,0.0002003948],"category_scores_gemma":[0.00002669906,0.00005743052,0.0000273009,0.0002208722,0.00004579133,0.00004814391,0.00009844183,0.00006926752,0.00002052704],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002300526,"about_ca_system_score_gemma":0.00002928968,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.1404176,"about_ca_topic_score_gemma":0.1234627,"domain_scores_codex":[0.9991363,0.00003988135,0.0002351109,0.0002763488,0.00007296823,0.0002393409],"domain_scores_gemma":[0.9995683,0.000143246,0.0001162493,0.00005995253,0.00003468038,0.00007752215],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00001038854,0.00001159378,0.1119608,0.000003017922,0.0000097344,0.000003049631,0.00006052696,3.621308e-7,0.8843214,0.000004457414,0.0002499894,0.00336472],"study_design_scores_gemma":[0.0001421994,0.00003484464,0.9572106,0.000008978706,0.000009579829,0.000008081094,0.00006423443,0.00003697472,0.03566724,0.00002917316,0.006657519,0.0001305563],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974827,0.00004576072,0.00001998974,0.000639336,0.0002035157,0.00009695343,0.001461677,0.00003782051,0.00001231704],"genre_scores_gemma":[0.9982801,0.00007643041,0.00003369579,0.0003793337,0.0001012146,0.000003274956,0.001041515,0.000001226477,0.00008319227],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8486542,"threshold_uncertainty_score":0.8925318,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01799446149646877,"score_gpt":0.2003871876345886,"score_spread":0.1823927261381199,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}