{"id":"W4323347521","doi":"10.3201/eid2904.221594","title":"Experimental Infection of North American Deer Mice with Clade I and II Monkeypox Virus Isolates","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Mennonite University; Public Health Agency of Canada","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Public Health Agency; Public Health Agency of Canada","keywords":"Monkeypox; Enzootic; Clade; Virology; Biology; Virus; Transmission (telecommunications); Disease reservoir; Phylogenetics; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000379227,0.0001716438,0.0002390502,0.0002537794,0.0003659092,0.00001380623,0.000070713,0.00003932743,0.00009516216],"category_scores_gemma":[0.00005832937,0.0001454763,0.00006366346,0.0005407364,0.0004146585,0.0001606437,0.0001315951,0.0001559586,0.0000964461],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003171791,"about_ca_system_score_gemma":0.00004467272,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003407799,"about_ca_topic_score_gemma":0.001285925,"domain_scores_codex":[0.9990375,0.00009649601,0.0001681997,0.0002653212,0.00005176961,0.000380695],"domain_scores_gemma":[0.9995409,0.00008578807,0.000100241,0.0001531768,0.00005310791,0.00006682934],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002975223,0.0003276472,0.8348114,0.0000336971,0.0003227741,0.000008502077,0.0005085644,0.0001154946,0.1536191,0.00002963527,0.002180775,0.007744811],"study_design_scores_gemma":[0.001101573,0.001159166,0.9185135,0.00002457471,0.00006563077,0.00003459919,0.000120328,0.00003766623,0.07127009,0.00001451405,0.007417626,0.0002406722],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977166,0.001318841,0.00003398858,0.00004138289,0.0001399788,0.0001673138,0.00007831961,0.0002854128,0.0002181413],"genre_scores_gemma":[0.9990031,0.0004576806,0.000004844665,0.00005367918,0.00003234866,0.00005329595,0.00009856159,0.00002307073,0.0002734092],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08370212,"threshold_uncertainty_score":0.5932351,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007939861104855348,"score_gpt":0.2591547936646836,"score_spread":0.2512149325598282,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}