{"id":"W4323348382","doi":"10.1094/mpmi-10-22-0204-a","title":"Genomic Resources of Four <i>Colletotrichum</i> Species (<i>C. fioriniae</i>, <i>C. chrysophilum</i>, <i>C. noveboracense</i>, and <i>C. nupharicola</i>) Threatening Commercial Apple Production in the Eastern United States","year":2023,"lang":"en","type":"article","venue":"Molecular Plant-Microbe Interactions","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Food Inspection Agency","funders":"National Institute of Food and Agriculture; New York Farm Viability Institute; New York State Department of Agriculture and Markets","keywords":"Biology; Postharvest; Colletotrichum acutatum; Colletotrichum; Botany; Malus; Horticulture; Phylogenetic tree; Ornamental plant; Inoculation","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005998639,0.0005002302,0.0005197406,0.002473715,0.00133801,0.001137444,0.0006189083,0.0009620934,0.004250722],"category_scores_gemma":[0.001681524,0.0003548311,0.0007416611,0.003840889,0.0003029457,0.0006712218,0.0008995296,0.0009914449,0.002290307],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00100161,"about_ca_system_score_gemma":0.002579152,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0184656,"about_ca_topic_score_gemma":0.04641273,"domain_scores_codex":[0.9992799,0.0000461185,0.00007791666,0.0003071377,0.0001781334,0.0001107996],"domain_scores_gemma":[0.9983733,0.0002534347,0.0004477057,0.000165425,0.0004451516,0.0003149907],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0020562,0.0007481453,0.2806939,0.004689686,0.0006631323,0.002310768,0.006889413,0.003352651,0.4508256,0.005897664,0.07506938,0.1668035],"study_design_scores_gemma":[0.0001609646,0.0003567606,0.7506168,0.0006833598,0.0005432494,0.00105157,0.001660356,0.002374516,0.01487316,0.001168071,0.2264005,0.0001106535],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5200477,0.003770485,0.008105281,0.0009830449,0.0001320261,0.0008609323,0.447657,0.0006201761,0.01782328],"genre_scores_gemma":[0.2379956,0.001793633,0.01858601,0.0007649849,0.00006868803,0.000626109,0.7353622,0.000162511,0.004640289],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0184656,"threshold_uncertainty_score":0.03671628,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01940946790837098,"score_gpt":0.2365313289332865,"score_spread":0.2171218610249155,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}