{"id":"W4323352978","doi":"10.1093/jcag/gwac036.267","title":"A267 IDENTIFYING ENTEROBACTERIACEAE VIRULENCE GENES ASSOCIATED WITH ACTIVE DISEASE IN ULCERATIVE COLITIS PATIENTS USING CULTURE-DEPENDENT AND -INDEPENDENT APPROACHES","year":2023,"lang":"en","type":"article","venue":"Journal of the Canadian Association of Gastroenterology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"SickKids Foundation; University of Toronto; McMaster University","funders":"","keywords":"Virulence; Enterobacteriaceae; Ulcerative colitis; Microbiology; Biology; Microbiome; Inflammatory bowel disease; MacConkey agar; Escherichia coli; Colitis; Feces; Gut flora; Gene; Immunology; Disease; Genetics; Medicine; Internal medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005127723,0.0004730934,0.0005106486,0.001261194,0.0003969283,0.0007650545,0.0003138949,0.0005599895,0.002042071],"category_scores_gemma":[0.0009065709,0.0002531779,0.0006753629,0.001399964,0.0002969857,0.0001895151,0.000452113,0.0005649019,0.0006324463],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001903355,"about_ca_system_score_gemma":0.0002360825,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002187604,"about_ca_topic_score_gemma":0.002486541,"domain_scores_codex":[0.9992087,0.0001870235,0.00008296601,0.0002187832,0.0001757476,0.0001267114],"domain_scores_gemma":[0.9991611,0.0002162132,0.0001763971,0.00006183476,0.0002524854,0.0001319454],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.003605657,0.001096837,0.521731,0.0004396703,0.0002713234,0.0008279076,0.0005092396,0.0003791464,0.4550535,0.00009156331,0.0008835277,0.01511064],"study_design_scores_gemma":[0.00009735202,0.002726397,0.9404869,0.00006840269,0.0002381594,0.001910706,0.001058148,0.001494393,0.04861478,0.0000593308,0.003210697,0.00003465061],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9944688,0.0008971129,0.000939796,0.00007217554,0.00004840223,0.0001389987,0.00220082,0.00002237895,0.001211563],"genre_scores_gemma":[0.9859442,0.0006388122,0.004892885,0.0001733964,0.00005541044,0.0001827798,0.006342826,0.00001789568,0.001751893],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002187604,"threshold_uncertainty_score":0.006831467,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01815949524197836,"score_gpt":0.2341961503327391,"score_spread":0.2160366550907608,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}