{"id":"W4323533517","doi":"10.1111/jbg.12768","title":"Genome‐wide association studies for additive and dominance effects for body composition traits in commercial crossbred Piétrain pigs","year":2023,"lang":"en","type":"article","venue":"Journal of Animal Breeding and Genetics","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"Hendrix Genetics (Canada); University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Quantitative trait locus; Biology; Crossbreed; Genetic architecture; Genome-wide association study; Single-nucleotide polymorphism; Genetic association; Genetics; Candidate gene; Dominance (genetics); Whole genome sequencing; Gene; SNP; Association mapping; Genome; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004118114,0.0001207738,0.0002479274,0.00006753214,0.0001187191,0.00002877353,0.00006611394,0.0001208546,2.860795e-7],"category_scores_gemma":[0.0004520446,0.0001172228,0.00006645578,0.00006560922,0.00006261796,0.000006141388,0.00003613703,0.00008008576,1.405732e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002448655,"about_ca_system_score_gemma":0.00004035916,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":6.223418e-7,"about_ca_topic_score_gemma":0.000007165336,"domain_scores_codex":[0.9992078,0.00003704327,0.0002913254,0.000159847,0.00009611491,0.0002078785],"domain_scores_gemma":[0.9989974,0.0004715853,0.0002303666,0.0000346097,0.0002098307,0.00005619379],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.002216847,0.000106295,0.01903578,0.0003302156,0.0003409725,0.000002709335,0.002088138,0.0002529201,0.9545451,0.0003159696,0.006068239,0.01469676],"study_design_scores_gemma":[0.002936599,0.005482591,0.9707432,0.00008797713,0.00009153846,0.00001455598,0.000395798,0.0001222176,0.0162233,0.001781109,0.001954043,0.0001670194],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9942815,0.002630784,0.001951643,0.0005562269,0.0001733835,0.000306697,0.00008574784,0.000003419663,0.00001061052],"genre_scores_gemma":[0.9877599,0.0009278539,0.01053715,0.0001536735,0.0005109809,0.00002033307,0.00002431241,0.00001476016,0.0000510709],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9517075,"threshold_uncertainty_score":0.4780205,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02115199318257752,"score_gpt":0.2972907883510226,"score_spread":0.276138795168445,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}