{"id":"W4324017996","doi":"10.1093/nar/gkad152","title":"PML and PML-like exonucleases restrict retrotransposons in jawed vertebrates","year":2023,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; College of Engineering, Michigan State University; Killam Trusts; Dalhousie University; Beatrice Hunter Cancer Research Institute; Michigan State University; National Institutes of Health; Univerza v Ljubljani; Dalhousie Medical Research Foundation; Centre National de la Recherche Scientifique; Cancer Research Institute; National Science Foundation","keywords":"Biology; Retrotransposon; Genetics; Evolutionary biology; Transposable element; Genome; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001296904,0.0001416628,0.0001266067,0.0003417084,0.0002452247,0.000314647,0.000183221,0.0002237739,0.0007099085],"category_scores_gemma":[0.0001414758,0.0001620834,0.0001761297,0.0002267465,0.0002687156,0.0001950728,0.0003281304,0.0002392508,0.0002780622],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003720965,"about_ca_system_score_gemma":0.000204202,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001061571,"about_ca_topic_score_gemma":0.001659243,"domain_scores_codex":[0.9998631,0.000007524216,0.00001694011,0.00005413826,0.00003887383,0.00001944534],"domain_scores_gemma":[0.9999142,0.000009172257,0.00004151876,0.00001099583,0.000008496359,0.00001566487],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000451311,0.000002933069,0.002939974,0.00002845775,0.000003762222,0.0001182871,0.00006397269,0.00004634371,0.9929304,0.0003347827,0.000009164271,0.003476742],"study_design_scores_gemma":[0.00003084912,0.0003198583,0.3530724,0.00005350643,0.00008141725,0.007776603,0.0003146988,0.001120305,0.6190552,0.001377486,0.01676737,0.00003037242],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9931182,0.001348928,0.003481451,0.0000337151,0.000004912416,0.0000115507,0.000220875,0.00004886086,0.001731558],"genre_scores_gemma":[0.9914092,0.0007887049,0.004485081,0.00002966095,0.000005498761,0.00001232324,0.0005048378,0.00001608994,0.002748551],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001061571,"threshold_uncertainty_score":0.002699792,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07032936482081757,"score_gpt":0.3082288406333641,"score_spread":0.2378994758125466,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}