{"id":"W4324020207","doi":"10.1128/spectrum.04393-22","title":"Role of Toll-Like Receptor 4 in Mycobacterium avium subsp. <i>paratuberculosis</i> Infection of Bovine Mammary Epithelial (MAC-T) Cells <i>In Vitro</i>","year":2023,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Biology; CXCL10; Chemokine; TLR2; Paratuberculosis; Innate immune system; Interleukin 8; TLR4; Tumor necrosis factor alpha; Immune system; CXCL16; Immunology; Microbiology; Inflammation; Mycobacterium","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005500372,0.000278596,0.0008504305,0.0008114079,0.00002784366,0.000009243313,0.0002026618,0.0003538721,0.0002915133],"category_scores_gemma":[0.00007868687,0.0002640363,0.0002095127,0.00114642,0.0001831141,0.000114288,0.0001932135,0.0004485027,0.0002556225],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001567125,"about_ca_system_score_gemma":0.0002010164,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001488598,"about_ca_topic_score_gemma":0.00071752,"domain_scores_codex":[0.9975907,0.0002476117,0.0007508244,0.0005079075,0.0001230788,0.0007798635],"domain_scores_gemma":[0.9989266,0.000192705,0.0001816729,0.0004857794,0.00007003086,0.0001431831],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001492729,0.0004075516,0.0944932,0.0002098039,0.00005380622,0.00004690621,0.000119552,0.000003268555,0.8981367,0.00002471821,0.004735421,0.0002763406],"study_design_scores_gemma":[0.002024431,0.0007133975,0.08432066,0.0001119593,0.00002918719,0.00005067054,0.00002869684,0.00002524471,0.9011248,0.00007031803,0.01131441,0.0001861937],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995841,0.0003634595,0.00000402795,0.001361346,0.0005682533,0.0006100081,0.0004958745,0.00007254125,0.0006835065],"genre_scores_gemma":[0.9962212,0.001959618,0.0001567869,0.0002786736,0.0001663057,0.00006525745,0.0007430693,0.00003646484,0.0003726387],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01017253,"threshold_uncertainty_score":0.9999812,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007084719408682412,"score_gpt":0.2375570629271911,"score_spread":0.2304723435185086,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}