{"id":"W4324020377","doi":"10.1017/ice.2023.34","title":"Coronavirus disease 2019 (COVID-19) outbreak on an in-patient medical unit associated with unrecognized exposures in common areas—Epidemiological and whole-genome sequencing investigation","year":2023,"lang":"en","type":"article","venue":"Infection Control and Hospital Epidemiology","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; St. Michael's Hospital; Sinai Health System; Public Health Ontario; Hospital for Sick Children; Ontario Institute for Cancer Research; University Health Network; University of Toronto","funders":"Government of Canada; Government of Ontario; Ontario Genomics; Genome Canada","keywords":"Outbreak; Epidemiology; Medicine; Transmission (telecommunications); Pandemic; Disease; Coronavirus; Public health; Coronavirus disease 2019 (COVID-19); Medical emergency; Infectious disease (medical specialty); Virology; Pathology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005691745,0.0003669789,0.0002457743,0.000722351,0.001383207,0.0007916462,0.0005576831,0.000518709,0.0008423148],"category_scores_gemma":[0.0009817021,0.0002424301,0.000258579,0.0008211585,0.000520006,0.0002855615,0.0008116605,0.0006234486,0.0001090133],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.003040074,"about_ca_system_score_gemma":0.003585765,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.243643,"about_ca_topic_score_gemma":0.3560154,"domain_scores_codex":[0.9994298,0.00009548236,0.00004741012,0.00008260748,0.0001522537,0.0001924115],"domain_scores_gemma":[0.9992127,0.00007199996,0.0002258255,0.0000288255,0.0002406928,0.0002198329],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001533502,0.0001621836,0.9839224,0.00008902331,0.00006760973,0.004294355,0.001502515,0.0001920972,0.004242789,0.0001138494,0.001166137,0.004093868],"study_design_scores_gemma":[0.000009851059,0.0001053919,0.9942836,0.00003757541,0.00002052652,0.001080048,0.002997501,0.0003419657,0.0003244352,0.00002377485,0.0007697411,0.000005694145],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986585,0.000112622,0.0001224437,0.0001785822,0.000007952463,0.0000506933,0.0004147826,0.000004267235,0.0004500269],"genre_scores_gemma":[0.9977574,0.0002669296,0.0004902228,0.0002743627,0.00002139992,0.0000212648,0.0008745707,0.000003096541,0.0002907897],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.243643,"threshold_uncertainty_score":0.4844497,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1266952802302919,"score_gpt":0.4018568074238701,"score_spread":0.2751615271935781,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}