{"id":"W4324020403","doi":"10.1016/j.virusres.2023.199088","title":"Broad-host-range lytic Erwinia phage Key with exopolysaccharide degrading activity","year":2023,"lang":"en","type":"article","venue":"Virus Research","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Hospital for Sick Children","keywords":"Biology; Lytic cycle; Erwinia; Genome; Pantoea; Bacteriophage; Gene; Prophage; Genetics; Pantoea agglomerans; Phagemid; Cosmid; Microbiology; Bacteria; Escherichia coli; Virus","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0006382479,0.0001508527,0.0001542346,0.000194398,0.0005393581,0.0001669482,0.0003843838,0.00007517482,0.005185552],"category_scores_gemma":[0.00007735025,0.0001251662,0.00006259437,0.001401878,0.0003176902,0.0004957264,0.0004260559,0.0005692713,0.01286719],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003180557,"about_ca_system_score_gemma":0.00002644215,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008963417,"about_ca_topic_score_gemma":0.003711242,"domain_scores_codex":[0.9979036,0.0001617252,0.000135081,0.0004717233,0.000546575,0.0007812926],"domain_scores_gemma":[0.9991141,0.0002088296,0.0000366492,0.0004139368,0.00002355422,0.0002029418],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00008791553,0.00008094335,0.001979484,0.000009773348,0.00001643117,0.00009895828,0.0004783807,0.00001723554,0.980213,0.00001239878,0.007903563,0.009101952],"study_design_scores_gemma":[0.0007099527,0.0003713927,0.5056092,0.00007468542,0.00001806391,0.0000568727,0.0003883474,0.00110595,0.4224182,0.00007364623,0.06871714,0.000456589],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9867449,0.00001874661,0.00006172899,0.0005518915,0.000114578,0.0003159927,0.00003165375,0.0001440458,0.01201651],"genre_scores_gemma":[0.98586,0.0001231601,0.0001459474,0.00006331126,0.000081292,0.00006346285,0.000004048363,0.00003817823,0.01362058],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5577947,"threshold_uncertainty_score":0.997636,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07856999273614994,"score_gpt":0.3601935169775211,"score_spread":0.2816235242413711,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}