{"id":"W4324058378","doi":"10.3390/v15030735","title":"Phylogenetic and Evolutionary Studies of Grapevine Pinot Gris Virus Isolates from Canada","year":2023,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; Ministry of Agriculture, Food and Rural Affairs; Brock University","funders":"Agriculture and Agri-Food Canada; Genome British Columbia; Genome Canada","keywords":"Clade; Subclade; Phylogenetic tree; Biology; Nova scotia; Phylogenetics; Genome; Evolutionary biology; Genetics; Geography; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000838983,0.000117689,0.0002255483,0.00001939919,0.0002015142,0.00001063657,0.0001466097,0.00003070634,0.00006583913],"category_scores_gemma":[0.0002193438,0.00004516911,0.0000275976,0.0003848912,0.0001688426,0.00006879334,0.0002342704,0.00005817146,0.00001742689],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000229674,"about_ca_system_score_gemma":0.00002359282,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.5082254,"about_ca_topic_score_gemma":0.6256779,"domain_scores_codex":[0.9990838,0.00005888706,0.0001710206,0.0002165979,0.0002243994,0.0002453084],"domain_scores_gemma":[0.9988289,0.0009439173,0.00005387386,0.00004323692,0.00007054992,0.00005954238],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002437366,0.00001596999,0.03274637,0.00001189142,0.0001085494,0.000009875382,0.00005074155,0.000004868055,0.941275,0.00001096636,0.02041171,0.005329651],"study_design_scores_gemma":[0.00008877491,0.0001333338,0.9170699,0.0000383472,0.00001730173,0.000001238375,0.0006961258,0.00002739888,0.05652987,0.0009681071,0.02427515,0.0001545071],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9805447,0.01608055,3.439487e-8,0.0005781439,0.00007869285,0.00009504201,0.002548636,0.00004537596,0.00002881192],"genre_scores_gemma":[0.9854679,0.01408241,0.00001521755,0.0002065164,0.00009994885,0.00001671089,0.0000509385,8.534956e-7,0.00005947069],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8847452,"threshold_uncertainty_score":0.4950494,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07943441358388088,"score_gpt":0.2850637200047474,"score_spread":0.2056293064208665,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}