{"id":"W4327682542","doi":"10.1093/bioinformatics/btad136","title":"GENLIB: new function to simulate haplotype transmission in large complex genealogies","year":2023,"lang":"en","type":"article","venue":"Bioinformatics","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Hôpital Maisonneuve-Rosemont; Université du Québec à Chicoutimi; University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Foundation for Innovation; Canadian Institutes of Health Research; University of Ottawa; Canarie","keywords":"Haplotype; R package; Computer science; Function (biology); Transmission (telecommunications); Proband; Genealogy; Theoretical computer science; Biology; Mutation; Genetics; Programming language; History; Telecommunications; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002554646,0.001588658,0.001482548,0.00124449,0.0006458474,0.001800908,0.003450427,0.001447336,0.04931977],"category_scores_gemma":[0.01161454,0.001467669,0.002464506,0.001384105,0.0006319631,0.001350217,0.002159391,0.002026701,0.01944254],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009025881,"about_ca_system_score_gemma":0.002050237,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006765838,"about_ca_topic_score_gemma":0.007757835,"domain_scores_codex":[0.9992237,0.0003629914,0.00005624498,0.0001481947,0.0001428981,0.00006590741],"domain_scores_gemma":[0.997642,0.001571602,0.0001355456,0.0003326155,0.0002127044,0.0001054229],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0007735392,0.0001428411,0.02256528,0.001803006,0.001691358,0.0006541013,0.0006284326,0.1760501,0.003553021,0.03121275,0.6645316,0.09639407],"study_design_scores_gemma":[0.0009025523,0.0001188139,0.004706174,0.0002884688,0.0003341237,0.0009691528,0.00009322833,0.589754,0.006104998,0.07587102,0.3206375,0.0002198781],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.01753284,0.00135803,0.6239697,0.001113949,0.0006425682,0.0002182456,0.08924586,0.2579404,0.007978417],"genre_scores_gemma":[0.1290833,0.00142426,0.5477868,0.003034033,0.0004119511,0.002800338,0.1412714,0.1586313,0.01555674],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.04931977,"threshold_uncertainty_score":0.1649911,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03691441329216019,"score_gpt":0.29490424534431,"score_spread":0.2579898320521498,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}