{"id":"W4327950940","doi":"10.3390/microorganisms11030792","title":"Comparative Genomic Analysis of Virulent Vibrio (Listonella) anguillarum Serotypes Revealed Genetic Diversity and Genomic Signatures in the O-Antigen Biosynthesis Gene Cluster","year":2023,"lang":"en","type":"article","venue":"Microorganisms","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Waterloo; Fisheries and Oceans Canada; Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada; Canada First Research Excellence Fund; Ocean Frontier Institute","keywords":"Vibrio anguillarum; Biology; Serotype; Virulence; Microbiology; Gene cluster; Genetics; Gene; Pathogen; Vibrio; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008896725,0.0003120048,0.0002162948,0.0006542188,0.0001975697,0.0003007204,0.0001284105,0.0001589055,0.0005720251],"category_scores_gemma":[0.0002180044,0.0001104208,0.0003191948,0.0007243542,0.0001649854,0.0001009919,0.0002374031,0.000284013,0.0002148687],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000261423,"about_ca_system_score_gemma":0.0002723145,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01004697,"about_ca_topic_score_gemma":0.01302901,"domain_scores_codex":[0.9998784,0.000007625596,0.000007011194,0.00004658765,0.00002626362,0.00003406212],"domain_scores_gemma":[0.9998217,0.00002853527,0.00006107497,0.00001435266,0.00003853501,0.00003586169],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002037698,0.00003064315,0.02610531,0.00006466104,0.00002153668,0.0001256609,0.0002500224,0.0001076592,0.968863,0.00005087268,0.0000397784,0.004137157],"study_design_scores_gemma":[0.000006998387,0.0004007545,0.9507217,0.00001612907,0.00006098397,0.0005027293,0.0005005962,0.0005007378,0.04524915,0.00005403921,0.001974592,0.00001153129],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976683,0.0001877158,0.0004534851,0.00001463604,0.000004588603,0.00001112501,0.001197049,0.000008714235,0.0004543301],"genre_scores_gemma":[0.9934652,0.0002105626,0.001302063,0.00003805866,0.000006139598,0.0000180171,0.003958145,0.000008744648,0.0009930535],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01004697,"threshold_uncertainty_score":0.01997697,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01537730948841591,"score_gpt":0.2280952711885163,"score_spread":0.2127179617001004,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}