{"id":"W4353020380","doi":"10.1099/mgen.0.000958","title":"Rapid adaptations of Legionella pneumophila to the human host","year":2023,"lang":"en","type":"article","venue":"Microbial Genomics","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Fonds de recherche du Québec – Nature et technologies; Japan Society for the Promotion of Science; Carl Tryggers Stiftelse för Vetenskaplig Forskning; Science for Life Laboratory; Folkhälsomyndigheten; Vetenskapsrådet; Public Health Agency","keywords":"Legionella pneumophila; Biology; Gene; Population; Microbiology; Legionnaires' disease; Host (biology); Virology; Genetics; Bacteria","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002724231,0.0002995509,0.0003904442,0.0003197457,0.0002598414,0.0004997391,0.0001905139,0.0003928523,0.001410349],"category_scores_gemma":[0.0007008337,0.0001347607,0.0002600334,0.0002084999,0.0003315693,0.0003053396,0.0004797769,0.0003397773,0.000295752],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002796564,"about_ca_system_score_gemma":0.000217499,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005846304,"about_ca_topic_score_gemma":0.0005334034,"domain_scores_codex":[0.9995203,0.0001087926,0.00002484261,0.0001469339,0.00009677155,0.000102399],"domain_scores_gemma":[0.9996316,0.00005638021,0.00012078,0.00006552917,0.00005397454,0.0000716689],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007667921,0.0001286957,0.124411,0.0001025263,0.00008058424,0.001783197,0.0004460408,0.0003326068,0.8609688,0.0002934222,0.0002423681,0.01044405],"study_design_scores_gemma":[0.00004772645,0.002460395,0.8170281,0.0000528639,0.0001518298,0.01580039,0.001173523,0.001095367,0.1521845,0.0005105768,0.009422706,0.00007200694],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985124,0.0004573561,0.0003332465,0.00005459861,0.000006794624,0.000007082298,0.00007779826,0.00001531363,0.000535392],"genre_scores_gemma":[0.9990414,0.0002062007,0.0003092868,0.00004938514,0.000009229559,0.00000538533,0.0001360746,0.000006693746,0.0002363593],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001410349,"threshold_uncertainty_score":0.004718065,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02828146836205718,"score_gpt":0.2737227721068242,"score_spread":0.245441303744767,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}