{"id":"W4360857178","doi":"10.3390/vetsci10040242","title":"Description of Antimicrobial-Resistant Escherichia coli and Their Dissemination Mechanisms on Dairy Farms","year":2023,"lang":"en","type":"article","venue":"Veterinary Sciences","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Fonds de Recherche du Québec – Nature et Technologies; Cegep de Saint Hyacinthe","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Escherichia coli; Antibiotic resistance; Cephalosporin; Population; Antimicrobial; Genotype; Gene; Multiple drug resistance; Genetics; Dairy cattle; Genome; Whole genome sequencing; Mobile genetic elements; Microbiology; Biotechnology; Drug resistance; Antibiotics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002837386,0.0002770192,0.0003022951,0.002033099,0.0007060434,0.0009120057,0.0005287434,0.0004061681,0.001108665],"category_scores_gemma":[0.0007095053,0.0001543242,0.0001826498,0.002138148,0.0003615978,0.0002040334,0.000331158,0.0002013828,0.0001972232],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001513698,"about_ca_system_score_gemma":0.001136771,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.1749351,"about_ca_topic_score_gemma":0.2029154,"domain_scores_codex":[0.9993993,0.00004578306,0.00003509663,0.000148406,0.0002038049,0.0001675176],"domain_scores_gemma":[0.9992961,0.00007127628,0.0002320182,0.00003571311,0.0002532233,0.0001116304],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001113798,0.00004708481,0.9512457,0.00007467836,0.00004056871,0.001035189,0.0008617354,0.0001407406,0.0299518,0.00006316497,0.0001914156,0.01623665],"study_design_scores_gemma":[0.000002652675,0.00004100079,0.9973266,0.00001512061,0.00001021475,0.0005463291,0.0005932008,0.0001083531,0.0006554698,0.00001252186,0.0006830448,0.000005534594],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997357,0.0004155166,0.0003421459,0.00003696529,0.000002199174,0.00003194884,0.0006094572,0.00001012176,0.00119459],"genre_scores_gemma":[0.9971125,0.0006004469,0.000693,0.00004081446,0.000005735654,0.00001505733,0.000788533,0.000004114593,0.0007397804],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1749351,"threshold_uncertainty_score":0.3478336,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02840003857790004,"score_gpt":0.2768586795319392,"score_spread":0.2484586409540391,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}