{"id":"W4360857178","doi":"10.3390/vetsci10040242","title":"Description of Antimicrobial-Resistant Escherichia coli and Their Dissemination Mechanisms on Dairy Farms","year":2023,"lang":"en","type":"article","venue":"Veterinary Sciences","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Fonds de Recherche du Québec – Nature et Technologies; Cegep de Saint Hyacinthe","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Escherichia coli; Antibiotic resistance; Cephalosporin; Population; Antimicrobial; Genotype; Gene; Multiple drug resistance; Genetics; Dairy cattle; Genome; Whole genome sequencing; Mobile genetic elements; Microbiology; Biotechnology; Drug resistance; Antibiotics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003219522,0.0001053335,0.0001042307,0.0000712066,0.0001309934,0.00003945255,0.0001675376,0.00006295438,0.000005716341],"category_scores_gemma":[0.00004692353,0.00008227782,0.00003238063,0.0002394171,0.0002820724,0.00001185969,0.00009412714,0.00002860553,0.000004106766],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006348056,"about_ca_system_score_gemma":0.00002568535,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007304862,"about_ca_topic_score_gemma":0.000003235853,"domain_scores_codex":[0.9992513,0.00004960111,0.0001461153,0.000292804,0.00009882513,0.0001613306],"domain_scores_gemma":[0.9996823,0.00002067644,0.00008641247,0.0001511093,0.00002861764,0.00003088848],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008921641,0.00002069764,0.0005131947,0.00002602967,0.000006014323,0.000002343758,0.00008225791,0.000009440801,0.9981152,0.0002279783,0.0003137115,0.0005939259],"study_design_scores_gemma":[0.000154416,0.002078709,0.08983625,0.0001176143,0.00000503588,0.00001084814,0.0008384463,0.0003200397,0.9049538,0.0003922095,0.001091131,0.000201459],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983896,0.00004528506,0.0007762396,0.00009845453,0.0002182799,0.0001095084,0.00002683189,0.00001783201,0.000317958],"genre_scores_gemma":[0.9983539,0.0001567114,0.001118506,0.00004220111,0.0000268683,0.000002970288,0.00003032251,0.000007725297,0.0002607787],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09316136,"threshold_uncertainty_score":0.3355192,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02840003857790004,"score_gpt":0.2768586795319392,"score_spread":0.2484586409540391,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}