{"id":"W4360993442","doi":"10.1038/s41467-023-37303-4","title":"Large haploblocks underlie rapid adaptation in the invasive weed Ambrosia artemisiifolia","year":2023,"lang":"en","type":"article","venue":"Nature Communications","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":80,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Universitetet i Oslo; Svenska Forskningsrådet Formas; Human Frontier Science Program; Carl Tryggers Stiftelse för Vetenskaplig Forskning; Norwegian Sequencing Centre; NERC Environmental Bioinformatics Centre","keywords":"Ambrosia artemisiifolia; Adaptation (eye); Biology; Local adaptation; Evolutionary biology; Weed; Invasive species; Ecology; Ragweed; Population","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002563458,0.00009400977,0.00007437136,0.00007312217,0.0002696986,0.00003272873,0.0007948381,0.0002880037,0.00001655196],"category_scores_gemma":[0.0001537304,0.00008031538,0.00005820218,0.0004203458,0.00005897074,0.000005184829,0.0002345671,0.0003781151,0.0000439682],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001030688,"about_ca_system_score_gemma":0.00005828021,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002123087,"about_ca_topic_score_gemma":0.002010639,"domain_scores_codex":[0.9992095,0.0001883323,0.0001397446,0.0001620802,0.000141418,0.0001589095],"domain_scores_gemma":[0.9987137,0.0000758254,0.00006409448,0.001035292,0.00008183457,0.0000292875],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001912891,0.0005860073,0.03148214,0.00007642734,0.0003355154,0.00001473866,0.01796653,0.004062717,0.3382168,0.08559893,0.5129382,0.00853074],"study_design_scores_gemma":[0.0008069559,0.00006145469,0.3608879,0.00001700533,0.00003178526,0.000009593818,0.006385147,0.0006581545,0.001424309,0.00117195,0.6283217,0.0002240256],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9697941,0.00595256,0.0005108952,0.009359153,0.0005531561,0.001030783,0.000246732,0.00009403151,0.0124586],"genre_scores_gemma":[0.995483,0.000643734,0.0005128876,0.001288298,0.00007090376,0.00003753058,0.001648917,0.000008444305,0.0003062609],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3367925,"threshold_uncertainty_score":0.3275166,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03428544198787051,"score_gpt":0.29094832289478,"score_spread":0.2566628809069095,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}