{"id":"W4361005612","doi":"10.1139/gen-2022-0066","title":"Transposable elements in the transcriptome of the velvetbean caterpillar <i>Anticarsia gemmatalis</i> Hübner, 1818 (Lepidoptera: Erebidae)","year":2023,"lang":"en","type":"article","venue":"Genome","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Biology; Anticarsia gemmatalis; Transposable element; Genome; Genetics; Retrotransposon; Transcriptome; In silico; Bacillus thuringiensis; ORFS; Lepidoptera genitalia; Caterpillar; Gene; Open reading frame; Botany; Gene expression; Bacteria; Peptide sequence","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006771605,0.0001936758,0.0002468817,0.0003763254,0.0002383757,0.0002996169,0.00007438068,0.0001803182,0.0004698203],"category_scores_gemma":[0.0000901989,0.00009883875,0.0002745706,0.0004343609,0.0001088912,0.0001850699,0.000154707,0.0002167599,0.0002192197],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001956516,"about_ca_system_score_gemma":0.0001704138,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001587406,"about_ca_topic_score_gemma":0.002132451,"domain_scores_codex":[0.9999321,0.000004147302,0.000004118601,0.00003271228,0.00001270812,0.00001410352],"domain_scores_gemma":[0.9999379,0.00001101396,0.00002107908,0.00000327714,0.00001198788,0.00001462504],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00009969355,0.000005500197,0.003040663,0.00006137784,0.000007395447,0.00006517475,0.00008678177,0.00004726611,0.994224,0.00002217497,0.00003463436,0.002305347],"study_design_scores_gemma":[0.00001510376,0.0002537702,0.8833711,0.00003903989,0.0001345099,0.0008163548,0.0004672784,0.001381901,0.1077896,0.0001398559,0.005572716,0.00001890822],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945476,0.0011211,0.0009842762,0.00003923027,0.00000880923,0.000007287337,0.002695437,0.00004156028,0.0005547338],"genre_scores_gemma":[0.9849709,0.0008444278,0.002016454,0.00008523495,0.00001197763,0.00002509847,0.01027502,0.00002735123,0.00174358],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001587406,"threshold_uncertainty_score":0.003156304,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03432306108064737,"score_gpt":0.2414590848768909,"score_spread":0.2071360237962435,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}