{"id":"W4361214535","doi":"10.3390/plants12071476","title":"Assessing Genetic Distinctness and Redundancy of Plant Germplasm Conserved Ex Situ Based on Published Genomic SNP Data","year":2023,"lang":"en","type":"article","venue":"Plants","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada","keywords":"Germplasm; Biology; SNP; Single-nucleotide polymorphism; Genome; Genetics; Computational biology; Genotype; Gene; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001474304,0.0001220703,0.0001489341,0.00007064481,0.0000854234,0.00007256644,0.0002862047,0.000115386,0.000032735],"category_scores_gemma":[0.00008573908,0.0001185203,0.00002290937,0.00007730645,0.00006301666,0.000008606834,0.0002290634,0.00006128891,0.000007877247],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004171352,"about_ca_system_score_gemma":0.00006971573,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002678308,"about_ca_topic_score_gemma":0.00003817038,"domain_scores_codex":[0.9990712,0.00005721708,0.0001762097,0.0003765366,0.0001390121,0.0001797864],"domain_scores_gemma":[0.999246,0.0000402752,0.0001067438,0.0005045449,0.00002765638,0.00007477641],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004552311,0.00008653869,0.263085,0.000247284,0.000136074,0.00008450019,0.000145021,0.002011128,0.7090329,0.00003547485,0.01981057,0.004870327],"study_design_scores_gemma":[0.000973245,0.00007316953,0.9685355,0.00004760119,0.00003355411,0.00002742095,0.00009412378,0.005662698,0.01622621,0.00006264035,0.00803528,0.0002285317],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974108,0.00008308481,0.0001754486,0.0000817183,0.0002029158,0.0001101995,0.001385366,0.00001598109,0.0005344815],"genre_scores_gemma":[0.9950222,0.00003980229,0.0005710521,0.00009713945,0.00006159403,0.000001366101,0.004083531,0.0000109754,0.0001123568],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7054505,"threshold_uncertainty_score":0.4833119,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06362002942465804,"score_gpt":0.2886564758698681,"score_spread":0.22503644644521,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}