{"id":"W4361214535","doi":"10.3390/plants12071476","title":"Assessing Genetic Distinctness and Redundancy of Plant Germplasm Conserved Ex Situ Based on Published Genomic SNP Data","year":2023,"lang":"en","type":"article","venue":"Plants","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada","keywords":"Germplasm; Biology; SNP; Single-nucleotide polymorphism; Genome; Genetics; Computational biology; Genotype; Gene; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002096136,0.0004359689,0.0006621185,0.003648922,0.0004727248,0.0007976632,0.0005248009,0.0003734528,0.0007657088],"category_scores_gemma":[0.004197731,0.0001975874,0.0005979597,0.003174325,0.0003989782,0.0005129588,0.0008388326,0.0005483099,0.0002519503],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002646821,"about_ca_system_score_gemma":0.0002236619,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004249192,"about_ca_topic_score_gemma":0.001198781,"domain_scores_codex":[0.9984916,0.0002987174,0.0002404021,0.0005100289,0.0003815587,0.00007755899],"domain_scores_gemma":[0.9956322,0.001659365,0.001358468,0.0006243732,0.000498497,0.0002269945],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000856003,0.0001878971,0.2695078,0.0007921287,0.0008779835,0.0006711685,0.001485638,0.002519484,0.6783225,0.0004452772,0.0002117241,0.04412242],"study_design_scores_gemma":[0.00002521982,0.000475752,0.9175929,0.00005295458,0.0004770848,0.001554234,0.0006491135,0.006820109,0.06839437,0.0008181575,0.003078749,0.00006136795],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9826843,0.0004275069,0.01451434,0.00001748058,0.00001056746,0.00003121324,0.001770372,0.00006384443,0.0004803601],"genre_scores_gemma":[0.9544742,0.0002123114,0.03868399,0.00003164562,0.00001894087,0.00007444319,0.006196034,0.00005041702,0.0002581751],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003648922,"threshold_uncertainty_score":0.01108551,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06362002942465804,"score_gpt":0.2886564758698681,"score_spread":0.22503644644521,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}