{"id":"W4361252272","doi":"10.1021/acsinfecdis.2c00548","title":"Optimized Bioorthogonal Non-canonical Amino Acid Tagging to Identify Serotype-Specific Biomarkers in Verotoxigenic <i>Escherichia coli</i>","year":2023,"lang":"en","type":"article","venue":"ACS Infectious Diseases","topic":"Click Chemistry and Applications","field":"Chemistry","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bioorthogonal chemistry; VTEC; Bacteria; Escherichia coli; Listeria monocytogenes; Pathogenic bacteria; Biology; Microbiology; Serotype; Listeria; Biochemistry; Chemistry; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003770647,0.0004387004,0.0001961331,0.0002309894,0.0001299162,0.0002670909,0.0002096957,0.0004956085,0.0004186071],"category_scores_gemma":[0.0001942815,0.0002436193,0.0002628737,0.0002110082,0.0002438466,0.0002259931,0.0002770881,0.0005223057,0.0002522252],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002144364,"about_ca_system_score_gemma":0.00017471,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004137324,"about_ca_topic_score_gemma":0.001071236,"domain_scores_codex":[0.9997768,0.00003835583,0.00001234328,0.00005288997,0.00006910998,0.00005048062],"domain_scores_gemma":[0.9998943,0.00001934582,0.0000358927,0.00001003914,0.0000237229,0.00001670561],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002506521,0.00001145848,0.0000716974,0.00002653222,0.00000392671,0.00002699034,0.000008099999,0.000089505,0.9986691,0.00009774793,0.00004658392,0.0009231626],"study_design_scores_gemma":[0.000003405467,0.0001117727,0.000505998,0.000002204338,0.000004711054,0.00008094396,0.000007328325,0.0009992657,0.9971226,0.00003343122,0.001122383,0.000005815639],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9479716,0.001318311,0.04739485,0.0002100548,0.00008591694,0.0001340234,0.0003518633,0.0002811952,0.002252272],"genre_scores_gemma":[0.9312304,0.001683097,0.0611627,0.0003047271,0.00001626317,0.0001083215,0.0008095503,0.00006939732,0.004615513],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0004956085,"threshold_uncertainty_score":0.001994073,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01799429774014499,"score_gpt":0.2906538300168494,"score_spread":0.2726595322767044,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}