{"id":"W4361270293","doi":"10.21203/rs.3.rs-2733578/v1","title":"Molecular Characterization of Glaesserella parasuis Strains Circulating in North American Swine Production Systems","year":2023,"lang":"en","type":"preprint","venue":"Research Square","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"Iowa State University","keywords":"Multilocus sequence typing; Serotype; Virulence; Biology; Genome; Whole genome sequencing; Gene; In silico; Phylogenetics; Genetics; Molecular epidemiology; Microbiology; Virology; Genotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003547316,0.000339945,0.0001689724,0.001173747,0.0004125277,0.0004322458,0.000222901,0.0002370853,0.0006139422],"category_scores_gemma":[0.0002752563,0.0001189047,0.0001875979,0.0009391436,0.0002587632,0.0002038335,0.0001940828,0.0001750704,0.00009656116],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003847061,"about_ca_system_score_gemma":0.0004527019,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01579271,"about_ca_topic_score_gemma":0.02120772,"domain_scores_codex":[0.999762,0.00003534949,0.00001768136,0.0000861874,0.00004154092,0.00005724556],"domain_scores_gemma":[0.9996524,0.00005781494,0.0001173071,0.00002086063,0.00008390921,0.00006772789],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001367904,0.00008441551,0.9640759,0.0000413774,0.00003117782,0.000284813,0.0005661259,0.000177318,0.02779289,0.00003559472,0.0001069062,0.006666612],"study_design_scores_gemma":[0.000002177914,0.0001369929,0.9974198,0.000006792525,0.00001437214,0.0001838239,0.000528314,0.0001931779,0.001127493,0.00001125279,0.0003732328,0.000002546721],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994226,0.00005628934,0.0001091098,0.000009000687,0.000001798776,0.000007493952,0.0001771019,0.000002708322,0.000213937],"genre_scores_gemma":[0.9988672,0.00007821347,0.0003349851,0.00001866328,0.000003088162,0.000007876045,0.0005169134,0.000001303609,0.0001718196],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01579271,"threshold_uncertainty_score":0.03140157,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06588770580039424,"score_gpt":0.3718344820229665,"score_spread":0.3059467762225723,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}