{"id":"W4361297857","doi":"10.1186/s40168-023-01496-z","title":"Gut commensal Enterocloster species host inoviruses that are secreted in vitro and in vivo","year":2023,"lang":"en","type":"article","venue":"Microbiome","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia Hospital; Canadian Institute for Advanced Research; University of British Columbia","funders":"Michael Smith Health Research BC; Canada Foundation for Innovation; Natural Sciences and Engineering Research Council of Canada; University of British Columbia; Canadian Institute for Advanced Research","keywords":"Biology; Microbiology; Secretion; Biofilm; Prophage; Bacteria; In vivo; In vitro; Escherichia coli; Bacteriophage; Genetics; Gene; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003187821,0.0006356412,0.0003513483,0.0002084617,0.0001419826,0.000723919,0.0001543186,0.0004157713,0.0007456533],"category_scores_gemma":[0.0003662393,0.0001922259,0.0003484742,0.0001601538,0.0002423858,0.0002888289,0.000354072,0.0005112884,0.0004195187],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001515409,"about_ca_system_score_gemma":0.0001546247,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004729631,"about_ca_topic_score_gemma":0.0008426122,"domain_scores_codex":[0.9996001,0.00007268674,0.00003820347,0.00009358152,0.0001252423,0.00007013887],"domain_scores_gemma":[0.9996287,0.0001228523,0.00009652007,0.00004434234,0.00006153283,0.00004610197],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002661669,0.00001322278,0.0007502533,0.00004802079,0.000005823227,0.00001828084,0.00001635445,0.00002366164,0.9986865,0.000009510461,0.00001023449,0.0003914451],"study_design_scores_gemma":[0.000005739404,0.0004628967,0.01462779,0.00003286498,0.0000350666,0.0002495652,0.0001580938,0.0006500897,0.9822281,0.00003877175,0.001500332,0.00001065858],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.99147,0.001210487,0.004988658,0.00005949293,0.00004303347,0.00004889257,0.0006191025,0.00007749652,0.001482875],"genre_scores_gemma":[0.9849947,0.00102336,0.009753204,0.0001711322,0.00001780667,0.00007921102,0.001995166,0.00006596198,0.001899391],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007456533,"threshold_uncertainty_score":0.002494454,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0216908901606263,"score_gpt":0.232751953196012,"score_spread":0.2110610630353857,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}