{"id":"W4362475099","doi":"10.3390/metabo13040508","title":"Metabolically Active Zones Involving Fatty Acid Elongation Delineated by DESI-MSI Correlate with Pathological and Prognostic Features of Colorectal Cancer","year":2023,"lang":"en","type":"article","venue":"Metabolites","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University; Kingston Health Sciences Centre","funders":"Imperial College London; Natural Sciences and Engineering Research Council of Canada; Queen's University; Canada Research Chairs; Canadian Institute for Advanced Research","keywords":"Colorectal cancer; Histopathology; Pathology; H&E stain; Adenocarcinoma; Biopsy; Mass spectrometry imaging; Surgical pathology; Medicine; Metabolomics; Cancer; Internal medicine; Chemistry; Biology; Immunohistochemistry; Bioinformatics; Mass spectrometry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002307368,0.0002486185,0.0004330107,0.0001003928,0.0001258292,0.00002904328,0.000122351,0.0001592901,0.00001366455],"category_scores_gemma":[0.0004503054,0.0001763351,0.00006943227,0.0004375927,0.0002174162,0.00001088678,0.0001512879,0.0001402775,0.000001553303],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006359249,"about_ca_system_score_gemma":0.00004474302,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004554342,"about_ca_topic_score_gemma":0.00007038256,"domain_scores_codex":[0.9986714,0.0001158949,0.0002568047,0.0004504238,0.0001806861,0.0003248401],"domain_scores_gemma":[0.9992924,0.00006163713,0.0001682266,0.0001491343,0.0002466794,0.00008194421],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002552847,0.00006663323,0.03928392,0.00002537222,0.0002900285,0.000003841014,0.0001318669,0.00002048815,0.954326,0.0003851825,0.0004242915,0.004787073],"study_design_scores_gemma":[0.0005028848,0.000251614,0.4407434,0.00001240274,0.000175597,0.000007966892,0.0001628484,0.0001004132,0.5565534,0.0001065669,0.001186891,0.0001960266],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9698867,0.02871107,0.0004946052,0.0001656863,0.00009792658,0.0003182983,0.000193814,0.00004028918,0.0000916204],"genre_scores_gemma":[0.9879302,0.008283917,0.003016313,0.00006477998,0.00007800348,0.0001411893,0.0002740717,0.000025956,0.0001855154],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4014595,"threshold_uncertainty_score":0.7190735,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009036382977628358,"score_gpt":0.2447902825220121,"score_spread":0.2357538995443837,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}