{"id":"W4362505920","doi":"10.1128/mbio.00464-23","title":"<i>Rothia</i> from the Human Nose Inhibit <i>Moraxella catarrhalis</i> Colonization with a Secreted Peptidoglycan Endopeptidase","year":2023,"lang":"en","type":"article","venue":"mBio","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"National Center for Advancing Translational Sciences; U.S. National Library of Medicine; National Institute of General Medical Sciences; Texas State University; National Institutes of Health; Oklahoma State University; University of Wisconsin-Madison; National Institute of Allergy and Infectious Diseases; Division of Intramural Research, National Institute of Allergy and Infectious Diseases","keywords":"Moraxella catarrhalis; Microbiology; Peptidoglycan; Moraxella (Branhamella) catarrhalis; Moraxella; Endopeptidase; Colonization; Neisseriaceae; Biology; Chemistry; Bacteria; Streptococcus pneumoniae; Enzyme; Antibiotics; Biochemistry; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000256271,0.0002017638,0.0002626293,0.00009344032,0.0002924218,0.000110071,0.0001946845,0.00009445677,0.0006599572],"category_scores_gemma":[0.0002123661,0.0001294794,0.00007434671,0.0008691013,0.0001615281,0.0001000175,0.0001148191,0.0003020776,0.0006900178],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006820852,"about_ca_system_score_gemma":0.000178778,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003974268,"about_ca_topic_score_gemma":0.001495441,"domain_scores_codex":[0.9982904,0.0001070801,0.0002283146,0.0003846601,0.0005201187,0.0004694005],"domain_scores_gemma":[0.9986082,0.0002600666,0.00007638603,0.0005848719,0.0001730611,0.0002974503],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007153769,0.0002567036,0.4572783,0.0001242034,0.0001986666,0.001010136,0.002462256,0.00001177833,0.1918928,0.0002250254,0.3448025,0.00102232],"study_design_scores_gemma":[0.01262236,0.002634191,0.5237114,0.001136654,0.0004527078,0.0001311629,0.001697352,0.0004573896,0.2253112,0.0003103613,0.2305482,0.0009870796],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9899207,0.00008944372,0.00001690834,0.005577236,0.00006405548,0.0008350241,0.0003133146,0.0002606494,0.0029227],"genre_scores_gemma":[0.9917735,0.00009253485,0.00009057049,0.002821541,0.000455426,0.0001593833,0.002511743,0.00005010335,0.002045152],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1142543,"threshold_uncertainty_score":0.8869013,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.022590414152023,"score_gpt":0.2777339198255523,"score_spread":0.2551435056735293,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}