{"id":"W4362604513","doi":"10.1038/s41598-023-32078-6","title":"CRISPR-resolved virus-host interactions in a municipal landfill include non-specific viruses, hyper-targeted viral populations, and interviral conflicts","year":2023,"lang":"en","type":"article","venue":"Scientific Reports","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Joint Genome Institute; U.S. Department of Energy","keywords":"CRISPR; Host (biology); Virology; Virus; Biology; Host factors; Computational biology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003559673,0.0002091731,0.0003203948,0.0004118555,0.0007465773,0.0006503366,0.000223596,0.0003886994,0.000785502],"category_scores_gemma":[0.0004922593,0.0001611621,0.0002976677,0.0006103831,0.0004824251,0.0004110068,0.0006104416,0.00032395,0.0001974663],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006003956,"about_ca_system_score_gemma":0.0005882661,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003769709,"about_ca_topic_score_gemma":0.009635832,"domain_scores_codex":[0.9994835,0.0000600893,0.00002058673,0.0001687142,0.0001369522,0.0001302462],"domain_scores_gemma":[0.9997151,0.00005384578,0.0001012099,0.00003104057,0.00003897212,0.00005983421],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002940465,0.00008393185,0.108054,0.0001126549,0.00005740251,0.0009137573,0.0007971739,0.004558942,0.8684012,0.0008038228,0.0001954732,0.0157277],"study_design_scores_gemma":[0.00001687229,0.0009773083,0.3632464,0.00003769331,0.0001117764,0.001797725,0.004922414,0.02985135,0.5871758,0.002224953,0.009550305,0.00008748909],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976157,0.00006452833,0.00167813,0.00001614706,0.000002398504,0.000006126792,0.000130053,0.0000516563,0.0004353418],"genre_scores_gemma":[0.9978113,0.00003157302,0.001607074,0.00001354369,7.005542e-7,0.000007076103,0.0001542648,0.000007419279,0.0003671212],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003769709,"threshold_uncertainty_score":0.007495522,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03381777910113181,"score_gpt":0.3408019588734444,"score_spread":0.3069841797723126,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}