{"id":"W4362606685","doi":"10.3897/zookeys.1157.97921","title":"The mitochondrial genome of the bioluminescent fish Malacosteus niger Ayres, 1848 (Stomiidae, Actinopterygii) is large and complex, and contains an inverted-repeat structure","year":2023,"lang":"en","type":"article","venue":"ZooKeys","topic":"bioluminescence and chemiluminescence research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"Directorate for Biological Sciences; Natural Sciences and Engineering Research Council of Canada; Ministerstwo Edukacji i Nauki; Linnean Society of London; Royal Society","keywords":"Actinopterygii; Subfamily; Mitochondrial DNA; Inverted repeat; Biology; Genome; Fish <Actinopterygii>; Genetics; Evolutionary biology; Zoology; Gene; Fishery","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001814117,0.0002316258,0.000214708,0.00004230013,0.0003876961,0.00008709983,0.0004606677,0.0002323546,0.000057032],"category_scores_gemma":[0.00009030624,0.0001465151,0.00008575266,0.0002277616,0.0004894374,0.00001563924,0.0005076617,0.0001978023,0.000005572209],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001489637,"about_ca_system_score_gemma":0.00007785205,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001522629,"about_ca_topic_score_gemma":0.0009845935,"domain_scores_codex":[0.9983715,0.0001069683,0.0002684229,0.0004761725,0.0002653475,0.000511536],"domain_scores_gemma":[0.9989131,0.0000349886,0.000109623,0.0006534192,0.0001393272,0.0001495594],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001331432,0.00003561223,0.08666021,0.00005467637,0.00005802201,0.000003117991,0.0002147804,2.816494e-7,0.9043652,0.00002084369,0.007248941,0.001205127],"study_design_scores_gemma":[0.002316043,0.000403894,0.3139281,0.00005988943,0.00005852202,0.00003914025,0.001608865,0.0003668844,0.5606019,0.00008025919,0.1199659,0.0005706145],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972857,0.000388561,0.000008738272,0.001324477,0.0002111985,0.0004052026,0.0001675613,0.00001769367,0.0001908478],"genre_scores_gemma":[0.9958968,0.0009709563,0.00002752807,0.0006312078,0.0003218755,0.00001845652,0.0002418047,0.00002644298,0.001864947],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3437634,"threshold_uncertainty_score":0.5974714,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01416421349301142,"score_gpt":0.261932659615329,"score_spread":0.2477684461223176,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}