{"id":"W4363672576","doi":"10.1101/2023.04.10.536232","title":"Nutrient Limitation Sensitizes <i>Pseudomonas aeruginosa</i> to Vancomycin","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Pseudomonas aeruginosa; Vancomycin; Microbiology; Peptidoglycan; Antibiotics; Bacteria; Mutant; Biology; Antibiotic resistance; Siderophore; Genetics; Staphylococcus aureus; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009073065,0.0003225447,0.0003109441,0.000221444,0.0001605608,0.0003505489,0.0002126646,0.0003664349,0.003745914],"category_scores_gemma":[0.0002436918,0.0001853618,0.0001997695,0.000121871,0.0001604662,0.0001553871,0.0002716929,0.0004519028,0.001237868],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002800777,"about_ca_system_score_gemma":0.0001430985,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001796597,"about_ca_topic_score_gemma":0.001755494,"domain_scores_codex":[0.9998042,0.00002480269,0.00001535915,0.00002935975,0.00007350792,0.00005274625],"domain_scores_gemma":[0.9999086,0.0000254904,0.00001572857,0.00001695559,0.00001438533,0.00001882671],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003244423,0.00001284679,0.000218803,0.00001340743,0.000001362197,0.00004563307,0.000004646391,0.00002966601,0.9989945,0.00002169464,0.000107037,0.0005180839],"study_design_scores_gemma":[0.000007624893,0.0001655626,0.01272377,0.000007399714,0.000006639187,0.0005053284,0.00004390162,0.0007823405,0.9832941,0.00006792772,0.00238796,0.000007324687],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9917671,0.0005668949,0.001342947,0.0003561052,0.00004701577,0.00003973302,0.000753182,0.0002060796,0.004920852],"genre_scores_gemma":[0.9936063,0.000343431,0.000949793,0.0002078893,0.00001585674,0.00002565236,0.0009405211,0.00005208222,0.003858459],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003745914,"threshold_uncertainty_score":0.01253134,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01382227382803511,"score_gpt":0.2195355102863706,"score_spread":0.2057132364583355,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}