{"id":"W4365444166","doi":"10.1128/mra.01340-22","title":"Complete PacBio Single-Molecule Real-Time Sequence of a Novel Probiotic-Like Bacterium, Rouxiella badensis subsp. <i>acadiensis</i> , Isolated from the Biota of Wild Blueberries in the Acadian Forest","year":2023,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa; National Research Council Canada","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Probiotic; Biology; Whole genome sequencing; Homology (biology); Plasmid; Genome; Bacteria; Strain (injury); Computational biology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004084715,0.0002953582,0.0004020634,0.00007234009,0.0001517732,0.00002122151,0.0007176554,0.0002597744,0.000006896676],"category_scores_gemma":[0.00005754572,0.0002055805,0.0001401208,0.0004075932,0.0007127734,0.00000209671,0.0003846866,0.0001565093,0.00001259814],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002020685,"about_ca_system_score_gemma":0.00005883511,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006426685,"about_ca_topic_score_gemma":0.0006487599,"domain_scores_codex":[0.9981275,0.0002179923,0.0005468034,0.0005132331,0.00009213497,0.0005023569],"domain_scores_gemma":[0.9987408,0.0001248818,0.0003099005,0.0006617599,0.0001233822,0.00003927995],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001498022,0.0001095836,0.01950056,0.000015292,0.000218165,0.000003757297,0.001169373,0.0001068532,0.9748668,0.000008406302,0.003801011,0.00005038658],"study_design_scores_gemma":[0.005052781,0.002750593,0.05019528,0.0003627251,0.0003667509,0.0001331064,0.00458537,0.0004576314,0.2452156,0.00007542314,0.6893818,0.001422877],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9927081,0.0004882085,0.00001243971,0.0007706306,0.00008186234,0.0004949213,0.005208245,0.000007077595,0.0002285347],"genre_scores_gemma":[0.9934629,0.0003554407,0.0001645219,0.0009240671,0.00006930333,0.00002196427,0.004783639,0.00002981924,0.0001883083],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7296512,"threshold_uncertainty_score":0.8383327,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02665517105118127,"score_gpt":0.2313283260240751,"score_spread":0.2046731549728938,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}