{"id":"W4366083673","doi":"10.1128/mra.00097-23","title":"Complete Genome Sequence of an Endemic Mycobacterium bovis Strain from Wood Bison in Wood Buffalo National Park, Canada","year":2023,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Parks Canada; Canadian Food Inspection Agency","funders":"Parks Canada; Canadian Food Inspection Agency","keywords":"Mycobacterium bovis; Wildlife; National park; Bovine tuberculosis; Whole genome sequencing; Livestock; Biology; Strain (injury); Tuberculosis; Veterinary medicine; Genome; Mycobacterium tuberculosis; Ecology; Medicine; Genetics; Gene; Pathology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001986358,0.0005772078,0.000727584,0.001716745,0.001840177,0.0009110048,0.000686951,0.0005455118,0.003218162],"category_scores_gemma":[0.000666153,0.0002516816,0.0003503564,0.003692746,0.0003872878,0.0002355923,0.0004134052,0.0009559154,0.001371917],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.004267787,"about_ca_system_score_gemma":0.01297315,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.8331823,"about_ca_topic_score_gemma":0.9013593,"domain_scores_codex":[0.9997336,0.000008373882,0.00001425201,0.00005061515,0.0001360863,0.00005697798],"domain_scores_gemma":[0.9992137,0.00005953015,0.00006905026,0.00002003167,0.000445466,0.0001921349],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.002871825,0.0005040942,0.06210819,0.003327823,0.0002680499,0.005510568,0.004806847,0.002272793,0.7545449,0.001661462,0.06716672,0.0949568],"study_design_scores_gemma":[0.0002056608,0.000292773,0.7007021,0.0005826903,0.0004258104,0.002008724,0.003849772,0.001723004,0.02246576,0.0004632384,0.2670841,0.0001964047],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.4153731,0.008943397,0.006085823,0.001705356,0.0004040779,0.0006086,0.5497145,0.0005027725,0.01666229],"genre_scores_gemma":[0.3027507,0.007108524,0.02004902,0.0007445364,0.0000795721,0.0002021935,0.6535743,0.0002944818,0.01519668],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.1668177,"threshold_uncertainty_score":0.3356001,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04567481206848658,"score_gpt":0.2938492169015678,"score_spread":0.2481744048330813,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}