{"id":"W4366176885","doi":"10.3389/fvets.2023.1146626","title":"Metabolic signature of Mycobacterium avium subsp. paratuberculosis infected and infectious dairy cattle by integrating nuclear magnetic resonance analysis and blood indices","year":2023,"lang":"en","type":"article","venue":"Frontiers in Veterinary Science","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Ministero della Salute","keywords":"Paratuberculosis; Biology; Herd; Dairy cattle; Feces; Mycobacterium; Microbiology; Bacteria; Animal science; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005546197,0.0002762564,0.0003218741,0.0006284979,0.0001237458,0.0003619311,0.0001328595,0.0003505375,0.0001899476],"category_scores_gemma":[0.0004203742,0.000127694,0.0001951145,0.0004913852,0.000164399,0.000147659,0.000254266,0.0002166064,0.00005217584],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000117655,"about_ca_system_score_gemma":0.0001287266,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008917676,"about_ca_topic_score_gemma":0.001488448,"domain_scores_codex":[0.9997705,0.00006765016,0.00001282945,0.00005758064,0.00004591014,0.00004558602],"domain_scores_gemma":[0.9998133,0.00004555842,0.00006894122,0.00001302502,0.00003004105,0.00002924644],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001820272,0.0002550968,0.3160618,0.0001488172,0.000234751,0.0003996995,0.0004386971,0.002785454,0.645363,0.00006417871,0.0001313458,0.0322969],"study_design_scores_gemma":[0.00001632244,0.0008470468,0.9465163,0.00002477239,0.0002358575,0.0008065868,0.0005478467,0.01856267,0.03161013,0.0002023439,0.0006050137,0.00002509092],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981692,0.0001815077,0.001456048,0.00001044951,0.000001941517,0.00000341756,0.000106365,0.000005757222,0.0000653004],"genre_scores_gemma":[0.9967265,0.0001360138,0.00247388,0.00001723039,0.000007269198,0.000008487748,0.0005283129,0.000003502235,0.00009871003],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008917676,"threshold_uncertainty_score":0.002933145,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008510226206301989,"score_gpt":0.2601796477621461,"score_spread":0.2516694215558441,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}