{"id":"W4366351311","doi":"10.1093/sysbio/syad020","title":"Species Delimitation, Phylogenomics, and Biogeography of Sulawesi Flying Lizards: A Diversification History Complicated by Ancient Hybridization, Cryptic Species, and Arrested Speciation","year":2023,"lang":"en","type":"article","venue":"Systematic Biology","topic":"Amphibian and Reptile Biology","field":"Environmental Science","cited_by":37,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"National Center for Research Resources; Museum of Vertebrate Zoology; Lembaga Ilmu Pengetahuan Indonesia; National Science Foundation; National Institutes of Health; University of California","keywords":"Biology; Species complex; Phylogeography; Biogeography; Population; Endemism; Evolutionary biology; Phylogenetic tree; Ecology; Biological dispersal; Lineage (genetic); Zoology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004244465,0.0001400248,0.0003354524,0.000151374,0.0001267383,0.00001092039,0.0001277156,0.0001100132,0.00009521641],"category_scores_gemma":[0.0001505493,0.0001196978,0.00003927637,0.0003168296,0.0006536482,0.00005269572,0.0001371286,0.00004657155,0.00005384991],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001688015,"about_ca_system_score_gemma":0.00001216566,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000858291,"about_ca_topic_score_gemma":0.00002050351,"domain_scores_codex":[0.9986235,0.0002224894,0.0004928513,0.0003635505,0.0000997819,0.0001977517],"domain_scores_gemma":[0.9991328,0.0001466295,0.0003937719,0.0002168673,0.00004329343,0.00006670921],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002435738,0.00005805066,0.4675806,0.001665693,0.00007746095,0.000001285953,0.002113491,0.00007909954,0.5203763,0.002802365,0.005084309,0.0001369104],"study_design_scores_gemma":[0.000547073,0.0001752284,0.9854921,0.0002467904,0.00008323794,0.00001392484,0.001876016,0.006765463,0.001174388,0.0007444733,0.002560734,0.0003205887],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9940811,0.001067197,0.00327767,0.0001810998,0.000251989,0.0007197938,0.00004158622,0.00006528229,0.0003142667],"genre_scores_gemma":[0.9989006,0.0002924487,0.000271894,0.0000785666,0.00002034853,0.00002797557,0.0002194528,0.000008624714,0.0001800847],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5192019,"threshold_uncertainty_score":0.4881137,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02577516337966275,"score_gpt":0.2044684790986969,"score_spread":0.1786933157190341,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}